Last updated on 2025-07-19 08:49:28 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| graphsim | 1 | 12 | |
| leiden | 1 | 4 | 8 |
| matrixcalc | 2 | 11 | |
| vioplot | 13 |
Current CRAN status: NOTE: 1, OK: 12
Version: 1.0.4
Check: for unstated dependencies in vignettes
Result: NOTE
Warning in gzfile(file, mode) :
cannot open compressed file '/var/folders/2b/t0kwbtmn3p7brv2mvx39c9cr0000gn/T//RtmpyNX8tp/runrid2c45f212d27', probable reason 'No space left on device'
Error in gzfile(file, mode) : cannot open the connection
Execution halted
Flavor: r-oldrel-macos-x86_64
Current CRAN status: ERROR: 1, NOTE: 4, OK: 8
Version: 0.4.3.1
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘S. Thomas Kelly <tomkellygenetics@gmail.com>’
The Description field contains
to Leiden: guaranteeing well-connected communities. <arXiv:1810.08473>.
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: whether the package can be loaded
Result: ERROR
Unable to set up conda environment r-reticulate
run in terminal:
conda init
conda create -n r-reticulate
conda environment r-reticulate installed
Unable to install python modules igraph and leidenalg
run in terminal:
conda install -n r-reticulate -c conda-forge leidenalg python-igraph pandas umap-learn
python modules igraph and leidenalg installed
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpdbzII3/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpdbzII3/bin": No such file or directory
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpSgZ4I3/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpSgZ4I3/bin": No such file or directory
It looks like this package has a loading problem: see the messages for
details.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: whether the package can be loaded with stated dependencies
Result: WARN
Unable to set up conda environment r-reticulate
run in terminal:
conda init
conda create -n r-reticulate
conda environment r-reticulate installed
Unable to install python modules igraph and leidenalg
run in terminal:
conda install -n r-reticulate -c conda-forge leidenalg python-igraph pandas umap-learn
python modules igraph and leidenalg installed
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpen81os/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpen81os/bin": No such file or directory
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmp5SeJ4f/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmp5SeJ4f/bin": No such file or directory
It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package. All dependencies must be
declared in DESCRIPTION.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: whether the package can be unloaded cleanly
Result: WARN
---- unloading
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: loading without being on the library search path
Result: WARN
Unable to set up conda environment r-reticulate
run in terminal:
conda init
conda create -n r-reticulate
conda environment r-reticulate installed
Unable to install python modules igraph and leidenalg
run in terminal:
conda install -n r-reticulate -c conda-forge leidenalg python-igraph pandas umap-learn
python modules igraph and leidenalg installed
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpEMazQK/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpEMazQK/bin": No such file or directory
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpRArxGJ/bin/python': No such file.
In addition: Warning message:
In normalizePath(python_home) :
path[1]="/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpRArxGJ/bin": No such file or directory
It looks like this package has a loading problem when not on .libPaths:
see the messages for details.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: whether startup messages can be suppressed
Result: NOTE
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmphTlwtL/bin/python': No such file.
Error in python_config_impl(python) :
Error running '/tmp/check-CRAN-regular-hornik/cache/R/reticulate/uv/cache/builds-v0/.tmpeX7CvW/bin/python': No such file.
It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3.1
Check: installed package size
Result: NOTE
installed size is 5.5Mb
sub-directories of 1Mb or more:
doc 5.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 2, OK: 11
Version: 1.0-6
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘S. Thomas Kelly <tomkellygenetics@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Frederick",
family = "Novomestky",
role = "aut",
email = "fnovomes@poly.edu"),
person(given = c("S.", "Thomas"),
family = "Kelly",
role = "cre",
email = "tomkellygenetics@gmail.com"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13