Last updated on 2026-01-30 18:50:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.94 | 253.68 | 267.62 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.58 | 232.37 | 242.95 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.74 | 266.72 | 282.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 614.00 | 624.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 355.00 | 365.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 241.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [109s/571s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.048, elapsed: 1.919 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.821, system: 0.270, elapsed: 14.220 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 0.693 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.716, system: 0.732, elapsed: 36.943 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.009, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.095, system: 1.103, elapsed: 54.950 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.731, system: 0.081, elapsed: 2.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.898, system: 0.369, elapsed: 15.791 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.028, elapsed: 1.364 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.164, system: 0.909, elapsed: 181.676 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.428 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.764, system: 1.429, elapsed: 202.602 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.031, elapsed: 3.992 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.560, system: 0.060, elapsed: 23.202 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.327, system: 0.016, elapsed: 1.428 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.093, system: 0.942, elapsed: 181.537 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.006, elapsed: 0.589 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.292, system: 0.357, elapsed: 2.494 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.671, system: 1.450, elapsed: 214.986 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.042, elapsed: 4.850 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.556, system: 0.093, elapsed: 21.810 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.015, elapsed: 0.746 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.698, system: 0.821, elapsed: 48.230 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.003, elapsed: 0.193 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 18.257, system: 0.983, elapsed: 14.845 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 38.217, system: 1.991, elapsed: 91.998 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [100s/305s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.064, elapsed: 2.195 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.503, system: 0.182, elapsed: 15.547 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 0.575 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.332, system: 0.645, elapsed: 27.542 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.171 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.424, system: 0.937, elapsed: 46.852 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.029, elapsed: 2.136 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.564, system: 0.050, elapsed: 16.172 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.016, elapsed: 0.935 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.800, system: 0.781, elapsed: 108.070 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.912, system: 0.898, elapsed: 128.425 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.038, elapsed: 1.771 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.493, system: 0.064, elapsed: 11.202 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.014, elapsed: 0.675 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.365, system: 0.761, elapsed: 22.258 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.003, elapsed: 0.169 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.152, system: 0.297, elapsed: 0.924 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.814, system: 1.222, elapsed: 37.696 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.033, elapsed: 1.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.623, system: 0.093, elapsed: 12.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.363, system: 0.031, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.527, system: 0.819, elapsed: 52.628 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.002, elapsed: 0.166 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.050, system: 0.655, elapsed: 17.874 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.034, system: 1.663, elapsed: 85.441 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64