Last updated on 2025-09-07 08:49:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.11 | 242.53 | 256.64 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.25 | 233.38 | 243.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 220.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 209.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 233.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/156s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.437, system: 0.049, elapsed: 1.699 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.192, elapsed: 13.046 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.022, elapsed: 0.414 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.805, system: 0.305, elapsed: 5.376 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.011, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.963, system: 0.614, elapsed: 21.832 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.102, elapsed: 2.807 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.929, system: 0.243, elapsed: 19.112 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.020, elapsed: 0.551 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.886, system: 0.294, elapsed: 11.991 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.008, elapsed: 0.529 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.357, system: 0.702, elapsed: 36.329 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.067, elapsed: 4.894 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.086, system: 0.305, elapsed: 20.971 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.019, elapsed: 0.446 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.319, elapsed: 7.678 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.009, elapsed: 0.306 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.158, system: 0.268, elapsed: 1.636 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.685, system: 1.029, elapsed: 37.754 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.090, elapsed: 2.795 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.135, system: 0.361, elapsed: 14.763 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.020, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.004, system: 0.385, elapsed: 8.822 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.449 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.171, system: 0.639, elapsed: 22.711 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.993, system: 1.559, elapsed: 51.040 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.080, elapsed: 2.004 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.043, system: 0.273, elapsed: 14.763 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.024, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.306, elapsed: 5.506 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.011, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.127, system: 0.731, elapsed: 23.544 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.074, elapsed: 1.961 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.043, system: 0.344, elapsed: 17.012 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.027, elapsed: 0.471 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.754, system: 0.309, elapsed: 8.937 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.008, elapsed: 0.374 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.306, system: 0.827, elapsed: 29.751 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.084, elapsed: 3.728 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.019, system: 0.279, elapsed: 17.598 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.028, elapsed: 0.611 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.803, system: 0.365, elapsed: 9.448 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.021, elapsed: 0.426 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.045, system: 0.298, elapsed: 1.554 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.478, system: 1.127, elapsed: 34.856 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.042, elapsed: 3.006 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.845, system: 0.161, elapsed: 18.299 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.018, elapsed: 0.373 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.271, elapsed: 7.616 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.348 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.929, system: 0.577, elapsed: 18.441 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.932, system: 1.127, elapsed: 49.398 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64