Last updated on 2026-01-09 15:49:49 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.61 | 256.29 | 269.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.46 | 331.31 | 341.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.99 | 276.36 | 291.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.05 | 254.30 | 269.35 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 301.00 | 311.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 300.00 | 311.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/255s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.048, elapsed: 2.163 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.525, system: 0.082, elapsed: 12.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.018, elapsed: 0.471 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.628, system: 0.705, elapsed: 40.260 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.179 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.732, system: 0.880, elapsed: 55.927 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.035, elapsed: 2.382 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.730, system: 0.094, elapsed: 13.521 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.015, elapsed: 0.813 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.618, system: 0.783, elapsed: 14.981 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.870, system: 0.961, elapsed: 32.728 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.035, elapsed: 1.944 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.678, system: 0.070, elapsed: 12.411 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 0.713 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.045, system: 0.770, elapsed: 78.351 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.230 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.210, system: 0.258, elapsed: 1.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.534, system: 1.191, elapsed: 95.699 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.047, elapsed: 2.186 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.292, system: 0.077, elapsed: 10.154 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.326, system: 0.029, elapsed: 0.228 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.579, system: 0.646, elapsed: 25.960 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.211 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.735, system: 0.600, elapsed: 23.770 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.399, system: 1.435, elapsed: 63.338 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/224s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.698, system: 0.064, elapsed: 4.674 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.808, system: 0.189, elapsed: 26.501 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.019, elapsed: 0.567 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.349, system: 0.492, elapsed: 12.483 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.431 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.786, system: 0.794, elapsed: 46.223 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.029, elapsed: 4.314 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.575, system: 0.054, elapsed: 25.164 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.014, elapsed: 0.591 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.242, system: 0.429, elapsed: 12.752 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.419 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.368, system: 0.549, elapsed: 44.769 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.031, elapsed: 4.151 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.522, system: 0.065, elapsed: 25.063 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.014, elapsed: 0.611 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.335, system: 0.409, elapsed: 12.793 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.457 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.166, system: 0.249, elapsed: 1.976 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.622, system: 0.797, elapsed: 46.909 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.033, elapsed: 4.102 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.572, system: 0.064, elapsed: 23.975 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.015, elapsed: 0.544 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.286, system: 0.462, elapsed: 11.622 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.006, elapsed: 0.489 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.695, system: 0.624, elapsed: 29.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.176, system: 1.231, elapsed: 71.634 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64