Last updated on 2025-11-27 12:49:45 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.31 | 216.92 | 228.23 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 17.00 | 325.00 | 342.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 18.00 | 273.00 | 291.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/205s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.079, elapsed: 3.840 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.927, system: 0.252, elapsed: 20.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.025, elapsed: 0.468 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.114, system: 0.279, elapsed: 8.066 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.008, elapsed: 0.439 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.786, system: 0.709, elapsed: 34.910 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.081, elapsed: 3.376 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.840, system: 0.222, elapsed: 17.603 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.024, elapsed: 0.575 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.165, system: 0.306, elapsed: 9.379 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.487 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.762, system: 0.695, elapsed: 32.887 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.767, system: 0.077, elapsed: 5.428 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.911, system: 0.299, elapsed: 26.398 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.028, elapsed: 0.553 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.226, system: 0.354, elapsed: 11.410 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.009, elapsed: 0.452 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.341, system: 0.298, elapsed: 2.528 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.379, system: 1.328, elapsed: 49.466 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.650, system: 0.056, elapsed: 3.843 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.969, system: 0.292, elapsed: 20.701 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.020, elapsed: 0.438 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.360, system: 0.357, elapsed: 14.455 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.008, elapsed: 0.520 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.410, system: 0.754, elapsed: 30.298 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.499, system: 1.533, elapsed: 72.292 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [90s/183s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.761, system: 0.105, elapsed: 4.764 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.946, system: 0.271, elapsed: 23.107 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.024, elapsed: 0.404 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.079, system: 0.292, elapsed: 8.750 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.324 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.814, system: 0.868, elapsed: 39.214 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.047, elapsed: 3.398 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.912, system: 0.295, elapsed: 22.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.019, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.947, system: 0.241, elapsed: 6.833 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.006, elapsed: 0.292 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.501, system: 0.735, elapsed: 34.605 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.725, system: 0.094, elapsed: 3.506 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.960, system: 0.268, elapsed: 16.387 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.030, elapsed: 0.676 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.034, system: 0.290, elapsed: 9.330 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.008, elapsed: 0.352 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.130, system: 0.278, elapsed: 1.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.010, system: 1.181, elapsed: 33.703 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.648, system: 0.057, elapsed: 2.859 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.008, system: 0.366, elapsed: 23.404 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.021, elapsed: 0.421 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.179, system: 0.447, elapsed: 10.579 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.006, elapsed: 0.276 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.489, system: 0.871, elapsed: 23.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.394, system: 1.855, elapsed: 62.344 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64