Last updated on 2026-03-16 02:53:54 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| clitable | 3 | 11 | |
| RcppProgress | 2 | 12 | |
| Rfuzzycoco | 14 | ||
| srcpkgs | 5 | 9 |
Current CRAN status: ERROR: 3, OK: 11
Version: 0.1.0
Check: dependencies in R code
Result: WARN
Missing or unexported object: ‘datasets::penguins’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘clitable-Ex.R’ failed
The error most likely occurred in:
> ### Name: cli_table
> ### Title: generates a text table
> ### Aliases: cli_table
>
> ### ** Examples
>
> df <- head(datasets::penguins, 20)
Error: 'penguins' is not an exported object from 'namespace:datasets'
Execution halted
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [1s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(clitable))
>
> test_check("clitable")
Saving _problems/test-cli_table-64.R
Saving _problems/test-cli_table-104.R
Saving _problems/test-cli_table-147.R
<1b>[36m──<1b>[39m <1b>[1mclitable border styles<1b>[22m <1b>[36m──────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mstyle: single <1b>[1m<1b>[22m ──
┌────────────┬───────────┬────────────┬───────────┬───────┐
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
├────────────┼───────────┼────────────┼───────────┼───────┤
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
└────────────┴───────────┴────────────┴───────────┴───────┘
┌───┬───┬───┬───┬──────┐
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
└───┴───┴───┴───┴──────┘
── <1b>[1m<1b>[1mstyle: double <1b>[1m<1b>[22m ──
╔════════════╦═══════════╦════════════╦═══════════╦═══════╗
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╠════════════╬═══════════╬════════════╬═══════════╬═══════╣
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╚════════════╩═══════════╩════════════╩═══════════╩═══════╝
╔═══╦═══╦═══╦═══╦══════╗
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╚═══╩═══╩═══╩═══╩══════╝
── <1b>[1m<1b>[1mstyle: single-double <1b>[1m<1b>[22m ──
╓────────────╥───────────╥────────────╥───────────╥───────╖
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╟────────────╫───────────╫────────────╫───────────╫───────╢
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╙────────────╨───────────╨────────────╨───────────╨───────╜
╓───╥───╥───╥───╥──────╖
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╙───╨───╨───╨───╨──────╜
── <1b>[1m<1b>[1mstyle: double-single <1b>[1m<1b>[22m ──
╒════════════╤═══════════╤════════════╤═══════════╤═══════╕
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
╞════════════╪═══════════╪════════════╪═══════════╪═══════╡
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
╘════════════╧═══════════╧════════════╧═══════════╧═══════╛
╒═══╤═══╤═══╤═══╤══════╕
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
╘═══╧═══╧═══╧═══╧══════╛
── <1b>[1m<1b>[1mstyle: classic <1b>[1m<1b>[22m ──
+------------+-----------+------------+-----------+-------+
|Sepal.Length|Sepal.Width|Petal.Length|Petal.Width|Species|
+------------+-----------+------------+-----------+-------+
| 5.1 | 3.5 | 1.4 | 0.2 | setosa|
| 4.9 | 3.0 | 1.4 | 0.2 | setosa|
| 4.7 | 3.2 | 1.3 | 0.2 | setosa|
| 4.6 | 3.1 | 1.5 | 0.2 | setosa|
| 5.0 | 3.6 | 1.4 | 0.2 | setosa|
| 5.4 | 3.9 | 1.7 | 0.4 | setosa|
+------------+-----------+------------+-----------+-------+
+---+---+---+---+------+
|5.1|3.5|1.4|0.2|setosa|
|4.9|3.0|1.4|0.2|setosa|
|4.7|3.2|1.3|0.2|setosa|
|4.6|3.1|1.5|0.2|setosa|
|5.0|3.6|1.4|0.2|setosa|
|5.4|3.9|1.7|0.4|setosa|
+---+---+---+---+------+
<1b>[36m──<1b>[39m <1b>[1mheatmap columns<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mdefault heatmap settings<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom colors<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │108.0│ <1b>[44m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[44m1<1b>[49m │
│<1b>[43m21.4<1b>[49m│ 6 │258.0│<1b>[44m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m18.7<1b>[49m│ 8 │360.0│<1b>[43m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[44m2<1b>[49m │
│<1b>[44m18.1<1b>[49m│ 6 │225.0│<1b>[44m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m14.3<1b>[49m│ 8 │360.0│<1b>[43m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[43m4<1b>[49m │
│<1b>[43m24.4<1b>[49m│ 4 │146.7│ <1b>[44m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │140.8│ <1b>[44m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[44m19.2<1b>[49m│ 6 │167.6│<1b>[44m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[43m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom range<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mhilite rows<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
<1b>[41m│ 21 │ 6 │ 160 │110│ 3.9│ 2.62│16.46│ 0│ 1│ 4 │ 4 │<1b>[49m
│ 21 │ 6 │ 160 │110│ 3.9│2.875│17.02│ 0│ 1│ 4 │ 4 │
<1b>[41m│22.8│ 4 │ 108 │ 93│3.85│ 2.32│18.61│ 1│ 1│ 4 │ 1 │<1b>[49m
│21.4│ 6 │ 258 │110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│18.7│ 8 │ 360 │175│3.15│ 3.44│17.02│ 0│ 0│ 3 │ 2 │
│18.1│ 6 │ 225 │105│2.76│ 3.46│20.22│ 1│ 0│ 3 │ 1 │
<1b>[41m│14.3│ 8 │ 360 │245│3.21│ 3.57│15.84│ 0│ 0│ 3 │ 4 │<1b>[49m
│24.4│ 4 │146.7│ 62│3.69│ 3.19│ 20 │ 1│ 0│ 4 │ 2 │
│22.8│ 4 │140.8│ 95│3.92│ 3.15│ 22.9│ 1│ 0│ 4 │ 2 │
│19.2│ 6 │167.6│123│3.92│ 3.44│ 18.3│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mcombined<1b>[22m <1b>[36m────────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │<1b>[39m
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │<1b>[39m
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mnot all numeric<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
Saving _problems/test-demo-5.R
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
══ Skipped tests (6) ═══════════════════════════════════════════════════════════
• On CRAN (6): 'test-box.R:1:1', 'test-cli_table.R:78:1',
'test-cli_table.R:181:1', 'test-heatmap.R:2:1', 'test-heatmap.R:16:1',
'test-heatmap.R:69:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-cli_table.R:64:3'): cli_table ──────────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:64:3
── Error ('test-cli_table.R:104:3'): to_character_matrix ───────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:104:3
── Error ('test-cli_table.R:147:3'): column_widths ─────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. ├─base::as.matrix(head(datasets::penguins)) at test-cli_table.R:147:3
2. └─utils::head(datasets::penguins)
── Failure ('test-demo.R:5:3'): demo ───────────────────────────────────────────
Expected `demo()` not to throw any errors.
Actually got a <simpleError> with message:
'penguins' is not an exported object from 'namespace:datasets'
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(clitable))
>
> test_check("clitable")
Saving _problems/test-cli_table-64.R
Saving _problems/test-cli_table-104.R
Saving _problems/test-cli_table-147.R
<1b>[36m──<1b>[39m <1b>[1mclitable border styles<1b>[22m <1b>[36m──────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mstyle: single <1b>[1m<1b>[22m ──
┌────────────┬───────────┬────────────┬───────────┬───────┐
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
├────────────┼───────────┼────────────┼───────────┼───────┤
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
└────────────┴───────────┴────────────┴───────────┴───────┘
┌───┬───┬───┬───┬──────┐
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
└───┴───┴───┴───┴──────┘
── <1b>[1m<1b>[1mstyle: double <1b>[1m<1b>[22m ──
╔════════════╦═══════════╦════════════╦═══════════╦═══════╗
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╠════════════╬═══════════╬════════════╬═══════════╬═══════╣
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╚════════════╩═══════════╩════════════╩═══════════╩═══════╝
╔═══╦═══╦═══╦═══╦══════╗
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╚═══╩═══╩═══╩═══╩══════╝
── <1b>[1m<1b>[1mstyle: single-double <1b>[1m<1b>[22m ──
╓────────────╥───────────╥────────────╥───────────╥───────╖
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╟────────────╫───────────╫────────────╫───────────╫───────╢
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╙────────────╨───────────╨────────────╨───────────╨───────╜
╓───╥───╥───╥───╥──────╖
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╙───╨───╨───╨───╨──────╜
── <1b>[1m<1b>[1mstyle: double-single <1b>[1m<1b>[22m ──
╒════════════╤═══════════╤════════════╤═══════════╤═══════╕
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
╞════════════╪═══════════╪════════════╪═══════════╪═══════╡
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
╘════════════╧═══════════╧════════════╧═══════════╧═══════╛
╒═══╤═══╤═══╤═══╤══════╕
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
╘═══╧═══╧═══╧═══╧══════╛
── <1b>[1m<1b>[1mstyle: classic <1b>[1m<1b>[22m ──
+------------+-----------+------------+-----------+-------+
|Sepal.Length|Sepal.Width|Petal.Length|Petal.Width|Species|
+------------+-----------+------------+-----------+-------+
| 5.1 | 3.5 | 1.4 | 0.2 | setosa|
| 4.9 | 3.0 | 1.4 | 0.2 | setosa|
| 4.7 | 3.2 | 1.3 | 0.2 | setosa|
| 4.6 | 3.1 | 1.5 | 0.2 | setosa|
| 5.0 | 3.6 | 1.4 | 0.2 | setosa|
| 5.4 | 3.9 | 1.7 | 0.4 | setosa|
+------------+-----------+------------+-----------+-------+
+---+---+---+---+------+
|5.1|3.5|1.4|0.2|setosa|
|4.9|3.0|1.4|0.2|setosa|
|4.7|3.2|1.3|0.2|setosa|
|4.6|3.1|1.5|0.2|setosa|
|5.0|3.6|1.4|0.2|setosa|
|5.4|3.9|1.7|0.4|setosa|
+---+---+---+---+------+
<1b>[36m──<1b>[39m <1b>[1mheatmap columns<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mdefault heatmap settings<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom colors<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │108.0│ <1b>[44m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[44m1<1b>[49m │
│<1b>[43m21.4<1b>[49m│ 6 │258.0│<1b>[44m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m18.7<1b>[49m│ 8 │360.0│<1b>[43m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[44m2<1b>[49m │
│<1b>[44m18.1<1b>[49m│ 6 │225.0│<1b>[44m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m14.3<1b>[49m│ 8 │360.0│<1b>[43m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[43m4<1b>[49m │
│<1b>[43m24.4<1b>[49m│ 4 │146.7│ <1b>[44m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │140.8│ <1b>[44m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[44m19.2<1b>[49m│ 6 │167.6│<1b>[44m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[43m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom range<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mhilite rows<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
<1b>[41m│ 21 │ 6 │ 160 │110│ 3.9│ 2.62│16.46│ 0│ 1│ 4 │ 4 │<1b>[49m
│ 21 │ 6 │ 160 │110│ 3.9│2.875│17.02│ 0│ 1│ 4 │ 4 │
<1b>[41m│22.8│ 4 │ 108 │ 93│3.85│ 2.32│18.61│ 1│ 1│ 4 │ 1 │<1b>[49m
│21.4│ 6 │ 258 │110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│18.7│ 8 │ 360 │175│3.15│ 3.44│17.02│ 0│ 0│ 3 │ 2 │
│18.1│ 6 │ 225 │105│2.76│ 3.46│20.22│ 1│ 0│ 3 │ 1 │
<1b>[41m│14.3│ 8 │ 360 │245│3.21│ 3.57│15.84│ 0│ 0│ 3 │ 4 │<1b>[49m
│24.4│ 4 │146.7│ 62│3.69│ 3.19│ 20 │ 1│ 0│ 4 │ 2 │
│22.8│ 4 │140.8│ 95│3.92│ 3.15│ 22.9│ 1│ 0│ 4 │ 2 │
│19.2│ 6 │167.6│123│3.92│ 3.44│ 18.3│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mcombined<1b>[22m <1b>[36m────────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │<1b>[39m
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │<1b>[39m
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mnot all numeric<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
Saving _problems/test-demo-5.R
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
══ Skipped tests (6) ═══════════════════════════════════════════════════════════
• On CRAN (6): 'test-box.R:1:1', 'test-cli_table.R:78:1',
'test-cli_table.R:181:1', 'test-heatmap.R:2:1', 'test-heatmap.R:16:1',
'test-heatmap.R:69:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-cli_table.R:64:3'): cli_table ──────────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:64:3
── Error ('test-cli_table.R:104:3'): to_character_matrix ───────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:104:3
── Error ('test-cli_table.R:147:3'): column_widths ─────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. ├─base::as.matrix(head(datasets::penguins)) at test-cli_table.R:147:3
2. └─utils::head(datasets::penguins)
── Failure ('test-demo.R:5:3'): demo ───────────────────────────────────────────
Expected `demo()` not to throw any errors.
Actually got a <simpleError> with message:
'penguins' is not an exported object from 'namespace:datasets'
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(clitable))
>
> test_check("clitable")
Saving _problems/test-cli_table-64.R
Saving _problems/test-cli_table-104.R
Saving _problems/test-cli_table-147.R
<1b>[36m──<1b>[39m <1b>[1mclitable border styles<1b>[22m <1b>[36m──────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mstyle: single <1b>[1m<1b>[22m ──
┌────────────┬───────────┬────────────┬───────────┬───────┐
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
├────────────┼───────────┼────────────┼───────────┼───────┤
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
└────────────┴───────────┴────────────┴───────────┴───────┘
┌───┬───┬───┬───┬──────┐
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
└───┴───┴───┴───┴──────┘
── <1b>[1m<1b>[1mstyle: double <1b>[1m<1b>[22m ──
╔════════════╦═══════════╦════════════╦═══════════╦═══════╗
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╠════════════╬═══════════╬════════════╬═══════════╬═══════╣
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╚════════════╩═══════════╩════════════╩═══════════╩═══════╝
╔═══╦═══╦═══╦═══╦══════╗
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╚═══╩═══╩═══╩═══╩══════╝
── <1b>[1m<1b>[1mstyle: single-double <1b>[1m<1b>[22m ──
╓────────────╥───────────╥────────────╥───────────╥───────╖
║Sepal.Length║Sepal.Width║Petal.Length║Petal.Width║Species║
╟────────────╫───────────╫────────────╫───────────╫───────╢
║ 5.1 ║ 3.5 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.9 ║ 3.0 ║ 1.4 ║ 0.2 ║ setosa║
║ 4.7 ║ 3.2 ║ 1.3 ║ 0.2 ║ setosa║
║ 4.6 ║ 3.1 ║ 1.5 ║ 0.2 ║ setosa║
║ 5.0 ║ 3.6 ║ 1.4 ║ 0.2 ║ setosa║
║ 5.4 ║ 3.9 ║ 1.7 ║ 0.4 ║ setosa║
╙────────────╨───────────╨────────────╨───────────╨───────╜
╓───╥───╥───╥───╥──────╖
║5.1║3.5║1.4║0.2║setosa║
║4.9║3.0║1.4║0.2║setosa║
║4.7║3.2║1.3║0.2║setosa║
║4.6║3.1║1.5║0.2║setosa║
║5.0║3.6║1.4║0.2║setosa║
║5.4║3.9║1.7║0.4║setosa║
╙───╨───╨───╨───╨──────╜
── <1b>[1m<1b>[1mstyle: double-single <1b>[1m<1b>[22m ──
╒════════════╤═══════════╤════════════╤═══════════╤═══════╕
│Sepal.Length│Sepal.Width│Petal.Length│Petal.Width│Species│
╞════════════╪═══════════╪════════════╪═══════════╪═══════╡
│ 5.1 │ 3.5 │ 1.4 │ 0.2 │ setosa│
│ 4.9 │ 3.0 │ 1.4 │ 0.2 │ setosa│
│ 4.7 │ 3.2 │ 1.3 │ 0.2 │ setosa│
│ 4.6 │ 3.1 │ 1.5 │ 0.2 │ setosa│
│ 5.0 │ 3.6 │ 1.4 │ 0.2 │ setosa│
│ 5.4 │ 3.9 │ 1.7 │ 0.4 │ setosa│
╘════════════╧═══════════╧════════════╧═══════════╧═══════╛
╒═══╤═══╤═══╤═══╤══════╕
│5.1│3.5│1.4│0.2│setosa│
│4.9│3.0│1.4│0.2│setosa│
│4.7│3.2│1.3│0.2│setosa│
│4.6│3.1│1.5│0.2│setosa│
│5.0│3.6│1.4│0.2│setosa│
│5.4│3.9│1.7│0.4│setosa│
╘═══╧═══╧═══╧═══╧══════╛
── <1b>[1m<1b>[1mstyle: classic <1b>[1m<1b>[22m ──
+------------+-----------+------------+-----------+-------+
|Sepal.Length|Sepal.Width|Petal.Length|Petal.Width|Species|
+------------+-----------+------------+-----------+-------+
| 5.1 | 3.5 | 1.4 | 0.2 | setosa|
| 4.9 | 3.0 | 1.4 | 0.2 | setosa|
| 4.7 | 3.2 | 1.3 | 0.2 | setosa|
| 4.6 | 3.1 | 1.5 | 0.2 | setosa|
| 5.0 | 3.6 | 1.4 | 0.2 | setosa|
| 5.4 | 3.9 | 1.7 | 0.4 | setosa|
+------------+-----------+------------+-----------+-------+
+---+---+---+---+------+
|5.1|3.5|1.4|0.2|setosa|
|4.9|3.0|1.4|0.2|setosa|
|4.7|3.2|1.3|0.2|setosa|
|4.6|3.1|1.5|0.2|setosa|
|5.0|3.6|1.4|0.2|setosa|
|5.4|3.9|1.7|0.4|setosa|
+---+---+---+---+------+
<1b>[36m──<1b>[39m <1b>[1mheatmap columns<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
── <1b>[1m<1b>[1mdefault heatmap settings<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom colors<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│ <1b>[43m21<1b>[49m │ 6 │160.0│<1b>[44m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[43m4<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │108.0│ <1b>[44m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[44m1<1b>[49m │
│<1b>[43m21.4<1b>[49m│ 6 │258.0│<1b>[44m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m18.7<1b>[49m│ 8 │360.0│<1b>[43m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[44m2<1b>[49m │
│<1b>[44m18.1<1b>[49m│ 6 │225.0│<1b>[44m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[44m1<1b>[49m │
│<1b>[44m14.3<1b>[49m│ 8 │360.0│<1b>[43m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[43m4<1b>[49m │
│<1b>[43m24.4<1b>[49m│ 4 │146.7│ <1b>[44m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[43m22.8<1b>[49m│ 4 │140.8│ <1b>[44m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[44m2<1b>[49m │
│<1b>[44m19.2<1b>[49m│ 6 │167.6│<1b>[44m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[43m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
── <1b>[1m<1b>[1mheatmap custom range<1b>[1m<1b>[22m ──
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.620│16.46│ 0│ 1│ 4 │ 4 │
│ <1b>[41m21<1b>[49m │ 6 │160.0│110│3.90│2.875│17.02│ 0│ 1│ 4 │ 4 │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ 93│3.85│2.320│18.61│ 1│ 1│ 4 │ 1 │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│<1b>[42m18.7<1b>[49m│ 8 │360.0│175│3.15│3.440│17.02│ 0│ 0│ 3 │ 2 │
│<1b>[42m18.1<1b>[49m│ 6 │225.0│105│2.76│3.460│20.22│ 1│ 0│ 3 │ 1 │
│<1b>[42m14.3<1b>[49m│ 8 │360.0│245│3.21│3.570│15.84│ 0│ 0│ 3 │ 4 │
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ 62│3.69│3.190│20.00│ 1│ 0│ 4 │ 2 │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ 95│3.92│3.150│22.90│ 1│ 0│ 4 │ 2 │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│123│3.92│3.440│18.30│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mhilite rows<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
<1b>[41m│ 21 │ 6 │ 160 │110│ 3.9│ 2.62│16.46│ 0│ 1│ 4 │ 4 │<1b>[49m
│ 21 │ 6 │ 160 │110│ 3.9│2.875│17.02│ 0│ 1│ 4 │ 4 │
<1b>[41m│22.8│ 4 │ 108 │ 93│3.85│ 2.32│18.61│ 1│ 1│ 4 │ 1 │<1b>[49m
│21.4│ 6 │ 258 │110│3.08│3.215│19.44│ 1│ 0│ 3 │ 1 │
│18.7│ 8 │ 360 │175│3.15│ 3.44│17.02│ 0│ 0│ 3 │ 2 │
│18.1│ 6 │ 225 │105│2.76│ 3.46│20.22│ 1│ 0│ 3 │ 1 │
<1b>[41m│14.3│ 8 │ 360 │245│3.21│ 3.57│15.84│ 0│ 0│ 3 │ 4 │<1b>[49m
│24.4│ 4 │146.7│ 62│3.69│ 3.19│ 20 │ 1│ 0│ 4 │ 2 │
│22.8│ 4 │140.8│ 95│3.92│ 3.15│ 22.9│ 1│ 0│ 4 │ 2 │
│19.2│ 6 │167.6│123│3.92│ 3.44│ 18.3│ 1│ 0│ 4 │ 4 │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mcombined<1b>[22m <1b>[36m────────────────────────────────────────────────────────────────────<1b>[39m
┌────┬───┬─────┬───┬────┬─────┬─────┬──┬──┬────┬────┐
│ mpg│cyl│ disp│ hp│drat│ wt │ qsec│vs│am│gear│carb│
├────┼───┼─────┼───┼────┼─────┼─────┼──┼──┼────┼────┤
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.620│16.46│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│ <1b>[41m21<1b>[49m │ 6 │160.0│<1b>[42m110<1b>[49m│3.90│2.875│17.02│ 0│ 1│ 4 │ <1b>[41m4<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │108.0│ <1b>[42m93<1b>[49m│3.85│2.320│18.61│ 1│ 1│ 4 │ <1b>[42m1<1b>[49m │
│<1b>[41m21.4<1b>[49m│ 6 │258.0│<1b>[42m110<1b>[49m│3.08│3.215│19.44│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m18.7<1b>[49m│ 8 │360.0│<1b>[41m175<1b>[49m│3.15│3.440│17.02│ 0│ 0│ 3 │ <1b>[42m2<1b>[49m │<1b>[39m
│<1b>[42m18.1<1b>[49m│ 6 │225.0│<1b>[42m105<1b>[49m│2.76│3.460│20.22│ 1│ 0│ 3 │ <1b>[42m1<1b>[49m │
<1b>[33m│<1b>[42m14.3<1b>[49m│ 8 │360.0│<1b>[41m245<1b>[49m│3.21│3.570│15.84│ 0│ 0│ 3 │ <1b>[41m4<1b>[49m │<1b>[39m
│<1b>[41m24.4<1b>[49m│ 4 │146.7│ <1b>[42m62<1b>[49m│3.69│3.190│20.00│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[41m22.8<1b>[49m│ 4 │140.8│ <1b>[42m95<1b>[49m│3.92│3.150│22.90│ 1│ 0│ 4 │ <1b>[42m2<1b>[49m │
│<1b>[42m19.2<1b>[49m│ 6 │167.6│<1b>[42m123<1b>[49m│3.92│3.440│18.30│ 1│ 0│ 4 │ <1b>[41m4<1b>[49m │
└────┴───┴─────┴───┴────┴─────┴─────┴──┴──┴────┴────┘
<1b>[36m──<1b>[39m <1b>[1mnot all numeric<1b>[22m <1b>[36m─────────────────────────────────────────────────────────────<1b>[39m
Saving _problems/test-demo-5.R
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
══ Skipped tests (6) ═══════════════════════════════════════════════════════════
• On CRAN (6): 'test-box.R:1:1', 'test-cli_table.R:78:1',
'test-cli_table.R:181:1', 'test-heatmap.R:2:1', 'test-heatmap.R:16:1',
'test-heatmap.R:69:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-cli_table.R:64:3'): cli_table ──────────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:64:3
── Error ('test-cli_table.R:104:3'): to_character_matrix ───────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. └─utils::head(datasets::penguins) at test-cli_table.R:104:3
── Error ('test-cli_table.R:147:3'): column_widths ─────────────────────────────
Error: 'penguins' is not an exported object from 'namespace:datasets'
Backtrace:
▆
1. ├─base::as.matrix(head(datasets::penguins)) at test-cli_table.R:147:3
2. └─utils::head(datasets::penguins)
── Failure ('test-demo.R:5:3'): demo ───────────────────────────────────────────
Expected `demo()` not to throw any errors.
Actually got a <simpleError> with message:
'penguins' is not an exported object from 'namespace:datasets'
[ FAIL 4 | WARN 0 | SKIP 6 | PASS 40 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64
Current CRAN status: NOTE: 2, OK: 12
Version: 0.4.2
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Karl Forner <karl.forner@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Karl",
family = "Forner",
role = c("aut", "cre"),
email = "karl.forner@gmail.com")
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 14
Current CRAN status: ERROR: 5, OK: 9
Version: 0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [53s/67s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(srcpkgs))
>
> test_check("srcpkgs")
[ FAIL 7 | WARN 25 | SKIP 5 | PASS 589 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test-pkg_check.R:5:3', 'test-pkg_test.R:75:1',
'test-pkgs_check.R:5:3', 'test-pkgs_test.R:2:1', 'test-pkgs_test.R:66:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-pkg_meta.R:44:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:45:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:46:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$attached` to be FALSE.
Differences:
`actual` is NULL
`expected` is a logical vector (FALSE)
── Failure ('test-pkg_meta.R:54:3'): fetch_srcpkgs_meta ────────────────────────
Expected `fetch_srcpkgs_meta()$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:66:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:67:3'): fetch_srcpkgs_meta ────────────────────────
Expected `all(c("pkg1", "pkg2") %in% df$package)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test-pkg_meta.R:69:3'): fetch_srcpkgs_meta ──────────────────────────
Error in `expect_setequal(df$attached, c(TRUE, FALSE))`: `object` must be a vector, not `NULL`.
Backtrace:
▆
1. └─testthat::expect_setequal(object = df$attached) at test-pkg_meta.R:69:3
2. └─testthat:::check_vector(act$val, error_arg = "object")
3. └─testthat:::stop_input_type(x, "a vector", arg = error_arg, call = error_call)
4. └─rlang::abort(message, ..., call = call, arg = arg)
[ FAIL 7 | WARN 25 | SKIP 5 | PASS 589 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2
Check: examples
Result: ERROR
Running examples in ‘srcpkgs-Ex.R’ failed
The error most likely occurred in:
> ### Name: pkgs_install
> ### Title: installs a list of source packages
> ### Aliases: pkgs_install
>
> ### ** Examples
>
> pkg <- setup_and_get_dummy_srcpkg()
> dest <- tempfile()
> pkgs_install(pkg, dest)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/90s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(srcpkgs))
>
> test_check("srcpkgs")
[ FAIL 10 | WARN 3 | SKIP 5 | PASS 576 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test-pkg_check.R:5:3', 'test-pkg_test.R:75:1',
'test-pkgs_check.R:5:3', 'test-pkgs_test.R:2:1', 'test-pkgs_test.R:66:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-pkg_meta.R:44:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:45:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:46:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$attached` to be FALSE.
Differences:
`actual` is NULL
`expected` is a logical vector (FALSE)
── Failure ('test-pkg_meta.R:54:3'): fetch_srcpkgs_meta ────────────────────────
Expected `fetch_srcpkgs_meta()$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:66:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:67:3'): fetch_srcpkgs_meta ────────────────────────
Expected `all(c("pkg1", "pkg2") %in% df$package)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test-pkg_meta.R:69:3'): fetch_srcpkgs_meta ──────────────────────────
Error in `expect_setequal(df$attached, c(TRUE, FALSE))`: `object` must be a vector, not `NULL`.
Backtrace:
▆
1. └─testthat::expect_setequal(object = df$attached) at test-pkg_meta.R:69:3
2. └─testthat:::check_vector(act$val, error_arg = "object")
3. └─testthat:::stop_input_type(x, "a vector", arg = error_arg, call = error_call)
4. └─rlang::abort(message, ..., call = call, arg = arg)
── Error ('test-pkgs_install.R:10:3'): .pkgs_install ───────────────────────────
<callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition>
Error: ! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
Backtrace:
▆
1. └─srcpkgs::pkgs_install("GG", LIB, src_pkgs = src_pkgs, quiet = TRUE) at test-pkgs_install.R:10:3
2. ├─srcpkgs:::fast_unlist(lapply(pkgs_to_install, .process_pkg))
3. │ └─base::unlist(x, recursive, use.names)
4. └─base::lapply(pkgs_to_install, .process_pkg)
5. └─srcpkgs (local) FUN(X[[i]], ...)
6. └─srcpkgs:::pkg_install_nodeps(pkg$path, lib, quiet = quiet, ...)
7. ├─withr::with_libpaths(...)
8. │ └─base::force(code)
9. └─devtools::install(...)
10. └─(function() {...
11. ├─base::withCallingHandlers(...)
12. └─pak::local_install_deps(...)
13. └─pak:::remote(...)
14. └─err$throw(res$error)
── Error ('test-pkgs_install.R:43:3'): pkg_install_nodeps ──────────────────────
<callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition>
Error: ! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-pkgs_install.R:43:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─srcpkgs:::pkg_install_nodeps(src_pkgs$ZZ$path, LIB, quiet = TRUE)
8. ├─withr::with_libpaths(...)
9. │ └─base::force(code)
10. └─devtools::install(...)
11. └─(function() {...
12. ├─base::withCallingHandlers(...)
13. └─pak::local_install_deps(...)
14. └─pak:::remote(...)
15. └─err$throw(res$error)
── Failure ('test-plan.R:12:3'): execute_plan ──────────────────────────────────
Expected `nrow(plan)` to equal `nrow(mat2)`.
Differences:
`actual`: 7
`expected`: 5
[ FAIL 10 | WARN 3 | SKIP 5 | PASS 576 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘demo.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘demo.Rmd’
--- re-building ‘getting_started.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘getting_started.Rmd’
--- re-building ‘testing_and_checking.Rmd’ using rmarkdown
Quitting from testing_and_checking.Rmd:176-179 [checking]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! ! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
---
Backtrace:
▆
1. └─srcpkgs::pkgs_check(small_collection, quiet = TRUE)
2. └─srcpkgs::pkgs_install(pkgs, lib, src_pkgs = src_pkgs, quiet = TRUE)
3. ├─srcpkgs:::fast_unlist(lapply(pkgs_to_install, .process_pkg))
4. │ └─base::unlist(x, recursive, use.names)
5. └─base::lapply(pkgs_to_install, .process_pkg)
6. └─srcpkgs (local) FUN(X[[i]], ...)
7. └─srcpkgs:::pkg_install_nodeps(pkg$path, lib, quiet = quiet, ...)
8. ├─withr::with_libpaths(...)
9. │ └─base::force(code)
10. └─devtools::install(...)
11. └─(function() {...
12. ├─base::withCallingHandlers(...)
13. └─pak::local_install_deps(...)
14. └─pak:::remote(...)
15. └─err$throw(res$error)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'testing_and_checking.Rmd' failed with diagnostics:
! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
--- failed re-building ‘testing_and_checking.Rmd’
SUMMARY: processing the following file failed:
‘testing_and_checking.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> suppressPackageStartupMessages(library(srcpkgs))
>
> test_check("srcpkgs")
[ FAIL 10 | WARN 3 | SKIP 5 | PASS 576 ]
══ Skipped tests (5) ═══════════════════════════════════════════════════════════
• On CRAN (5): 'test-pkg_check.R:5:3', 'test-pkg_test.R:75:1',
'test-pkgs_check.R:5:3', 'test-pkgs_test.R:2:1', 'test-pkgs_test.R:66:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-pkg_meta.R:44:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:45:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:46:3'): fetch_srcpkgs_meta ────────────────────────
Expected `df$attached` to be FALSE.
Differences:
`actual` is NULL
`expected` is a logical vector (FALSE)
── Failure ('test-pkg_meta.R:54:3'): fetch_srcpkgs_meta ────────────────────────
Expected `fetch_srcpkgs_meta()$package` to be identical to "pkg1".
Differences:
`actual` is NULL
`expected` is a character vector ('pkg1')
── Failure ('test-pkg_meta.R:66:3'): fetch_srcpkgs_meta ────────────────────────
Expected `is.data.frame(df)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-pkg_meta.R:67:3'): fetch_srcpkgs_meta ────────────────────────
Expected `all(c("pkg1", "pkg2") %in% df$package)` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Error ('test-pkg_meta.R:69:3'): fetch_srcpkgs_meta ──────────────────────────
Error in `expect_setequal(df$attached, c(TRUE, FALSE))`: `object` must be a vector, not `NULL`.
Backtrace:
▆
1. └─testthat::expect_setequal(object = df$attached) at test-pkg_meta.R:69:3
2. └─testthat:::check_vector(act$val, error_arg = "object")
3. └─testthat:::stop_input_type(x, "a vector", arg = error_arg, call = error_call)
4. └─rlang::abort(message, ..., call = call, arg = arg)
── Error ('test-pkgs_install.R:10:3'): .pkgs_install ───────────────────────────
<callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition>
Error: ! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
Backtrace:
▆
1. └─srcpkgs::pkgs_install("GG", LIB, src_pkgs = src_pkgs, quiet = TRUE) at test-pkgs_install.R:10:3
2. ├─srcpkgs:::fast_unlist(lapply(pkgs_to_install, .process_pkg))
3. │ └─base::unlist(x, recursive, use.names)
4. └─base::lapply(pkgs_to_install, .process_pkg)
5. └─srcpkgs (local) FUN(X[[i]], ...)
6. └─srcpkgs:::pkg_install_nodeps(pkg$path, lib, quiet = quiet, ...)
7. ├─withr::with_libpaths(...)
8. │ └─base::force(code)
9. └─devtools::install(...)
10. └─(function() {...
11. ├─base::withCallingHandlers(...)
12. └─pak::local_install_deps(...)
13. └─pak:::remote(...)
14. └─err$throw(res$error)
── Error ('test-pkgs_install.R:43:3'): pkg_install_nodeps ──────────────────────
<callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition>
Error: ! error in pak subprocess
Caused by error in `get_user_cache_dir()`:
! R_USER_CACHE_DIR env var not set during package check, see https://github.com/r-lib/pkgcache#README
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-pkgs_install.R:43:3
2. │ └─testthat:::expect_condition_matching_(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. └─srcpkgs:::pkg_install_nodeps(src_pkgs$ZZ$path, LIB, quiet = TRUE)
8. ├─withr::with_libpaths(...)
9. │ └─base::force(code)
10. └─devtools::install(...)
11. └─(function() {...
12. ├─base::withCallingHandlers(...)
13. └─pak::local_install_deps(...)
14. └─pak:::remote(...)
15. └─err$throw(res$error)
── Failure ('test-plan.R:12:3'): execute_plan ──────────────────────────────────
Expected `nrow(plan)` to equal `nrow(mat2)`.
Differences:
`actual`: 7
`expected`: 5
[ FAIL 10 | WARN 3 | SKIP 5 | PASS 576 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2
Check: package dependencies
Result: ERROR
Package required but not available: ‘clitable’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64