CRAN Package Check Results for Maintainer ‘Jason Timm <JaTimm at salud.unm.edu>’

Last updated on 2025-07-29 02:50:47 CEST.

Package ERROR NOTE OK
hollr 13
puremoe 2 8 3
textpress 10 3

Package hollr

Current CRAN status: OK: 13

Package puremoe

Current CRAN status: ERROR: 2, NOTE: 8, OK: 3

Version: 1.0.2
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘source_pmc.R’ ‘source_pubmed.R’ ‘source_pubtations.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.0.2
Check: examples
Result: ERROR Running examples in 'puremoe-Ex.R' failed The error most likely occurred in: > ### Name: get_records > ### Title: Retrieve Data from 'NLM'/'PubMed' databases Based on PMIDs > ### Aliases: get_records > > ### ** Examples > > pmids <- c("38136652") > results <- get_records(pmids, endpoint = "pubmed_abstracts", cores = 1) Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils101 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.239</div> <div class="diags">Server: eutils101</div> <div class="diags">Time: Sun Jul 27 11:29:06 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.22.27</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:08 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils202 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.18.165</div> <div class="diags">Server: eutils202</div> <div class="diags">Time: Sun Jul 27 11:29:09 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.18.165</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:11 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils101 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.52</div> <div class="diags">Server: eutils101</div> <div class="diags">Time: Sun Jul 27 11:29:12 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.239</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:14 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils102 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.22.27</div> <div class="diags">Server: eutils102</div> <div class="diags">Time: Sun Jul 27 11:29:15 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.18.165</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:16 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils202 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.239</div> <div class="diags">Server: eutils202</div> <div class="diags">Time: Sun Jul 27 11:29:18 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils202 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.52</div> <div class="diags">Server: eutils202</div> <div class="diags">Time: Sun Jul 27 11:29:19 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils102 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.239</div> <div class="diags">Server: eutils102</div> <div class="diags">Time: Sun Jul 27 11:29:20 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils102 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.22.27</div> <div class="diags">Server: eutils102</div> <div class="diags">Time: Sun Jul 27 11:29:22 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.18.165</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:23 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils201 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.19.52</div> <div class="diags">Server: eutils201</div> <div class="diags">Time: Sun Jul 27 11:29:25 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error : HTTP failure: 500 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd"> <html> <head> <title>NCBI/eutils202 - WWW Error 500 Diagnostic</title> <style type="text/css"> h1.error {color: red; font-size: 40pt} div.diags {text-indent: 0.5in } </style> </head> <body> <h1>Server Error</h1> <p>Your request could not be processed due to a problem on our Web server. This could be a transient problem, please try the query again. If it doesn't clear up within a reasonable period of time, e-mail a short description of your query and the diagnostic information shown below to:</p> <p> pubmed@nlm.nih.gov - for problems with PubMed<br/> webadmin@ncbi.nlm.nih.gov - for problems with other services<br/> </p> <p>Thank you for your assistance. We will try to fix the problem as soon as possible. </p> <hr/> <p> Diagnostic Information:</p> <div class="diags">Error: 500</div> <div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = p u b m e d & a m p ; r e t t y p e = x m l & a m p ; r e t m o d e = & a m p ; i d = 3 8 1 3 6 6 5 2 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div> <div class="diags">Client: 130.14.18.165</div> <div class="diags">Server: eutils202</div> <div class="diags">Time: Sun Jul 27 11:29:26 EDT 2025</div> <p> NOTE: The above is an internal URL which may differ from the one you used to address the page.</p> <hr/> <p>Rev. 01/04/08</p> </body> </html> Error in UseMethod("read_xml") : no applicable method for 'read_xml' applied to an object of class "try-error" Calls: get_records ... FUN -> task_function -> .fetch_records -> <Anonymous> Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.2
Check: examples
Result: ERROR Running examples in ‘puremoe-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: get_records > ### Title: Retrieve Data from 'NLM'/'PubMed' databases Based on PMIDs > ### Aliases: get_records > > ### ** Examples > > pmids <- c("38136652") > results <- get_records(pmids, endpoint = "pubmed_abstracts", cores = 1) Error in read_xml.raw(charToRaw(enc2utf8(x)), "UTF-8", ..., as_html = as_html, : Opening and ending tag mismatch: br line 45 and p [76] Calls: get_records ... .fetch_records -> <Anonymous> -> read_xml.character -> read_xml.raw Execution halted Flavor: r-release-linux-x86_64

Package textpress

Current CRAN status: NOTE: 10, OK: 3

Version: 1.0.0
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘nlp_build_chunks.R’ ‘sem_search_corpus.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64