Last updated on 2025-12-24 09:50:15 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| attrib | 4 | 9 | |
| csalert | 4 | 9 | |
| csdata | 13 | ||
| csdb | 13 | ||
| csmaps | 3 | 10 | |
| cstidy | 13 | ||
| cstime | 13 | ||
| csutil | 13 | ||
| org | 13 | ||
| plnr | 13 |
Current CRAN status: ERROR: 4, OK: 9
Version: 2021.1.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [68s/69s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(attrib)
attrib 2021.1.2 https://folkehelseinstituttet.github.io/attrib
>
> test_check("attrib")
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%Saving _problems/test_fake-162.R
Saving _problems/test_fake-170.R
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 6 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_fake.R:159:3'): simmulations ─────────────────────────────────
Expected `round(as.numeric(median(dif_obs), 0))` to equal `c(0)`.
Differences:
1/1 mismatches
[1] -1 - 0 == -1
── Failure ('test_fake.R:167:3'): simmulations ─────────────────────────────────
Expected `round(as.numeric(median(dif), 0))` to equal `c(0)`.
Differences:
1/1 mismatches
[1] -1 - 0 == -1
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 6 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2021.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘intro.Rmd’ using rmarkdown
Quitting from intro.Rmd:388-394 [unnamed-chunk-20]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 11/11 in VECTOR_ELT
---
Backtrace:
▆
1. ├─...[]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'intro.Rmd' failed with diagnostics:
attempt access index 11/11 in VECTOR_ELT
--- failed re-building ‘intro.Rmd’
SUMMARY: processing the following file failed:
‘intro.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 2021.1.2
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘dlnm’ ‘ggplot2’ ‘mvmeta’ ‘pbs’ ‘tsModel’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 2021.1.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘intro.Rmd’ using rmarkdown
Quitting from intro.Rmd:388-394 [unnamed-chunk-20]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 11/11 in VECTOR_ELT
---
Backtrace:
▆
1. ├─...[]
2. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'intro.Rmd' failed with diagnostics:
attempt access index 11/11 in VECTOR_ELT
--- failed re-building ‘intro.Rmd’
SUMMARY: processing the following file failed:
‘intro.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: ERROR: 4, OK: 9
Version: 2024.6.24
Check: examples
Result: ERROR
Running examples in ‘csalert-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: signal_detection_hlm
> ### Title: Determine the short term trend of a timeseries
> ### Aliases: signal_detection_hlm signal_detection_hlm.csfmt_rts_data_v1
>
> ### ** Examples
>
> d <- cstidy::nor_covid19_icu_and_hospitalization_csfmt_rts_v1
> d <- d[granularity_time=="isoyearweek"]
> res <- csalert::signal_detection_hlm(
+ d,
+ value = "hospitalization_with_covid19_as_primary_cause_n",
+ baseline_isoyears = 1
+ )
Error in `[.data.table`(with_pred, , `:=`((baseline$var[i]), shift(get(value), :
attempt access index 20/20 in VECTOR_ELT
Calls: <Anonymous> ... signal_detection_hlm.csfmt_rts_data_v1 -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 2024.6.24
Check: examples
Result: ERROR
Running examples in ‘csalert-Ex.R’ failed
The error most likely occurred in:
> ### Name: signal_detection_hlm
> ### Title: Determine the short term trend of a timeseries
> ### Aliases: signal_detection_hlm signal_detection_hlm.csfmt_rts_data_v1
>
> ### ** Examples
>
> d <- cstidy::nor_covid19_icu_and_hospitalization_csfmt_rts_v1
> d <- d[granularity_time=="isoyearweek"]
> res <- csalert::signal_detection_hlm(
+ d,
+ value = "hospitalization_with_covid19_as_primary_cause_n",
+ baseline_isoyears = 1
+ )
Error in `[.data.table`(with_pred, , `:=`((baseline$var[i]), shift(get(value), :
attempt access index 20/20 in VECTOR_ELT
Calls: <Anonymous> ... signal_detection_hlm.csfmt_rts_data_v1 -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 2025.8.21
Check: installed package size
Result: NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
data 4.6Mb
doc 1.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13