CRAN Package Check Results for Package glossa

Last updated on 2026-07-28 15:52:32 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.2.4	0.37	3.32	3.69	ERROR
r-devel-linux-x86_64-debian-gcc	1.2.4	0.32	2.86	3.18	ERROR
r-devel-linux-x86_64-fedora-clang	1.2.4			2.90	ERROR
r-devel-linux-x86_64-fedora-gcc	1.2.4			2.13	ERROR
r-devel-windows-x86_64	1.2.4	20.00	137.00	157.00	ERROR
r-patched-linux-x86_64	1.2.4	16.04	146.55	162.59	OK
r-release-linux-x86_64	1.2.4	15.88	145.33	161.21	OK
r-release-macos-arm64	1.2.4	4.00	35.00	39.00	OK
r-release-macos-x86_64	1.2.4			7.00	ERROR
r-release-windows-x86_64	1.2.4	19.00	153.00	172.00	OK
r-oldrel-macos-arm64	1.2.4				OK
r-oldrel-macos-x86_64	1.2.4	10.00	134.00	144.00	OK
r-oldrel-windows-x86_64	1.2.4	25.00	191.00	216.00	OK

Check Details

Version: 1.2.4
Check: package dependencies
Result: ERROR Package required but not available: ‘dbarts’ Package suggested but not available for checking: ‘flexsdm’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-x86_64

Version: 1.2.4
Check: tests
Result: ERROR Running 'testthat.R' [17s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(glossa) Loading required package: bs4Dash Attaching package: 'bs4Dash' The following object is masked from 'package:graphics': box Loading required package: shiny Attaching package: 'shiny' The following objects are masked from 'package:bs4Dash': actionButton, column, insertTab, navbarMenu, tabsetPanel > library(terra) terra 1.9.34 Attaching package: 'terra' The following objects are masked from 'package:testthat': compare, describe > library(sf) Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.1; sf_use_s2() is TRUE > > test_check("glossa") | | | 0% | |= | 2% | |=== | 4% | |==== | 6% | |====== | 8% | |======= | 10% | |======== | 12% | |========== | 14% | |=========== | 16% | |============= | 18% | |============== | 20% | |=============== | 22% | |================= | 24% | |================== | 26% | |==================== | 28% | |===================== | 30% | |====================== | 32% | |======================== | 34% | 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Spherical geometry (s2) switched off Spherical geometry (s2) switched on Spherical geometry (s2) switched off Spherical geometry (s2) switched on Saving _problems/test-cross_validate_model-118.R Saving _problems/test-cross_validate_model-158.R dist is assumed to be in decimal degrees (arc_degrees). dist is assumed to be in decimal degrees (arc_degrees). although coordinates are longitude/latitude, st_difference assumes that they are planar although coordinates are longitude/latitude, st_difference assumes that they are planar Running thinning with method 'precision' and thinning value 1 Running thinning with method 'precision' and thinning value 1 Running thinning with method 'distance' and thinning value 5e+05 Running thinning with method 'grid' and thinning value 0.05 Running thinning with method 'precision' and thinning value 3 [ FAIL 2 | WARN 0 | SKIP 12 | PASS 85 ] ══ Skipped tests (12) ══════════════════════════════════════════════════════════ • On CRAN (11): 'test-glossa_analysis.R:5:3', 'test-process_layers.R:5:3', 'test-process_polygon.R:5:3', 'test-read_validate_files.R:5:3', 'test-read_validate_files.R:18:3', 'test-read_validate_files.R:30:3', 'test-read_validate_files.R:42:3', 'test-read_validate_files.R:54:3', 'test-read_validate_files.R:78:3', 'test-read_validate_files.R:104:3', 'test-utils.R:4:3' • {flexsdm} is not installed (1): 'test-generate_pseudo_absences.R:98:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-cross_validate_model.R:118:3'): cross_validate_model runs ────── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─glossa::cross_validate_model(...) at test-cross_validate_model.R:118:3 2. └─glossa::fit_bart_model(...) 3. └─dbarts::bart(...) 4. └─dbarts::dbartsControl(...) 5. └─methods::new(...) 6. ├─methods::initialize(value, ...) 7. └─dbarts (local) initialize(value, ...) 8. ├─methods::callNextMethod() 9. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 10. └─methods::validObject(.Object) 11. ├─methods (local) anyStrings(validityMethod(object)) 12. │ └─base::isTRUE(x) 13. └─dbarts (local) validityMethod(object) 14. └─base::parse(text = deparse(RNGkind)[-1L]) ── Error ('test-cross_validate_model.R:158:3'): cross_validate_model is reproducible with seed ── Error in `parse(text = deparse(RNGkind)[-1L])`: <text>:1:22: unexpected ')' 1: binom.kind = NULL) ^ Backtrace: ▆ 1. └─glossa::cross_validate_model(...) at test-cross_validate_model.R:158:3 2. └─glossa::fit_bart_model(...) 3. └─dbarts::bart(...) 4. └─dbarts::dbartsControl(...) 5. └─methods::new(...) 6. ├─methods::initialize(value, ...) 7. └─dbarts (local) initialize(value, ...) 8. ├─methods::callNextMethod() 9. └─methods (local) .nextMethod(.Object = .Object, ... = ...) 10. └─methods::validObject(.Object) 11. ├─methods (local) anyStrings(validityMethod(object)) 12. │ └─base::isTRUE(x) 13. └─dbarts (local) validityMethod(object) 14. └─base::parse(text = deparse(RNGkind)[-1L]) [ FAIL 2 | WARN 0 | SKIP 12 | PASS 85 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64