Last updated on 2025-06-13 04:49:29 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.3 | 10.31 | 190.29 | 200.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.0.3 | 6.70 | 147.89 | 154.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.0.3 | 322.71 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.0.3 | 325.99 | OK | |||
| r-devel-windows-x86_64 | 0.0.3 | 13.00 | 195.00 | 208.00 | ERROR | |
| r-patched-linux-x86_64 | 0.0.3 | 10.30 | 189.75 | 200.05 | OK | |
| r-release-linux-x86_64 | 0.0.3 | 9.57 | 190.11 | 199.68 | OK | |
| r-release-macos-arm64 | 0.0.3 | 101.00 | ERROR | |||
| r-release-macos-x86_64 | 0.0.3 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 0.0.3 | 12.00 | 194.00 | 206.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.3 | 99.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 0.0.3 | 177.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 0.0.3 | 14.00 | 243.00 | 257.00 | OK |
Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'gaawr2.Rmd' using rmarkdown
running: bash -c "export message=\"Hello, world!\"
echo \"print('$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo ${message} | \
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \
cat
rm hello.*"
Quitting from gaawr2.Rmd:115-150 [diabetes]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `Cairo()`:
! Graphics API version mismatch
---
Backtrace:
▆
1. └─tools:::.buildOneVignette(...)
2. ├─base::tryCatch(...)
3. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
6. └─engine$weave(file, quiet = quiet, encoding = enc)
7. └─knitr:::vweave_rmarkdown(...)
8. └─rmarkdown::render(...)
9. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
10. └─knitr:::process_file(text, output)
11. ├─xfun:::handle_error(...)
12. ├─base::withCallingHandlers(...)
13. └─knitr:::process_group(group)
14. └─knitr:::call_block(x)
15. └─knitr:::block_exec(params)
16. └─knitr:::eng_r(options)
17. ├─base::unlist(sew(res, options))
18. ├─knitr::sew(res, options)
19. └─knitr:::sew.list(res, options)
20. └─base::lapply(x, sew, options, ...)
21. ├─knitr (local) FUN(X[[i]], ...)
22. └─knitr:::sew.recordedplot(X[[i]], ...)
23. └─base::mapply(...)
24. └─knitr (local) `<fn>`(...)
25. ├─knitr:::in_base_dir(...)
26. │ └─knitr:::in_dir(d, expr)
27. └─knitr:::plot2dev(...)
28. ├─base::do.call(...)
29. └─knitr (local) `<fn>`("gaawr2/diabetes-1.png", width = 8, height = 6)
30. └─Cairo (local) dev(..., dpi = dpi, units = "in")
31. └─Cairo::Cairo(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
Graphics API version mismatch
--- failed re-building 'gaawr2.Rmd'
--- re-building 'web.Rmd' using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building 'web.Rmd'
SUMMARY: processing the following file failed:
'gaawr2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:409-415 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
---
Backtrace:
▆
1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75)
2. └─base::.handleSimpleError(...)
3. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.0.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64