CRAN Package Check Results for Maintainer ‘Teng Fei <feit1 at mskcc.org>’

Last updated on 2025-07-16 05:49:50 CEST.

Package	ERROR	NOTE	OK
FLORAL	2	3	8

Package FLORAL

Current CRAN status: ERROR: 2, NOTE: 3, OK: 8

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Using-FLORAL-for-Microbiome-Analysis.Rmd’ using rmarkdown 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| --- finished re-building ‘Using-FLORAL-for-Microbiome-Analysis.Rmd’ --- re-building ‘Using-FLORAL-for-survival-models-with-longitudinal-microbiome-data.Rmd’ using rmarkdown --- finished re-building ‘Using-FLORAL-for-survival-models-with-longitudinal-microbiome-data.Rmd’ --- re-building ‘Using-FLORAL-with-phyloseq.Rmd’ using rmarkdown Quitting from Using-FLORAL-with-phyloseq.Rmd:25-41 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `file()`: ! cannot open the connection to 'https://figshare.com/ndownloader/files/33076496' --- Backtrace: ▆ 1. ├─... %>% distinct() 2. ├─dplyr::distinct(.) 3. ├─dplyr::select(., -Pool, -Run, -ShotgunBatchID) 4. ├─dplyr::distinct(.) 5. └─utils::read.csv("https://figshare.com/ndownloader/files/33076496") 6. └─utils::read.table(...) 7. └─base::file(file, "rt") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Using-FLORAL-with-phyloseq.Rmd' failed with diagnostics: cannot open the connection to 'https://figshare.com/ndownloader/files/33076496' --- failed re-building ‘Using-FLORAL-with-phyloseq.Rmd’ SUMMARY: processing the following file failed: ‘Using-FLORAL-with-phyloseq.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4.0
Check: installed package size
Result: NOTE installed size is 8.3Mb sub-directories of 1Mb or more: doc 1.2Mb libs 6.3Mb Flavor: r-oldrel-macos-arm64

Version: 0.5.0
Check: installed package size
Result: NOTE installed size is 10.2Mb sub-directories of 1Mb or more: R 1.7Mb doc 1.3Mb libs 6.4Mb Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-x86_64