Last updated on 2026-03-16 02:53:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9.0 | 3.99 | 82.91 | 86.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.9.0 | 3.32 | 55.57 | 58.89 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.9.0 | 7.00 | 126.62 | 133.62 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.9.0 | 8.00 | 139.64 | 147.64 | ERROR | |
| r-devel-macos-arm64 | 0.9.0 | 1.00 | 26.00 | 27.00 | OK | |
| r-devel-windows-x86_64 | 0.9.0 | 8.00 | 105.00 | 113.00 | OK | |
| r-patched-linux-x86_64 | 0.9.0 | 6.26 | 73.75 | 80.01 | OK | |
| r-release-linux-x86_64 | 0.9.0 | 3.77 | 72.12 | 75.89 | OK | |
| r-release-macos-arm64 | 0.9.0 | 1.00 | 31.00 | 32.00 | OK | |
| r-release-macos-x86_64 | 0.9.0 | 3.00 | 106.00 | 109.00 | OK | |
| r-release-windows-x86_64 | 0.9.0 | 7.00 | 102.00 | 109.00 | OK | |
| r-oldrel-macos-arm64 | 0.9.0 | 1.00 | 39.00 | 40.00 | OK | |
| r-oldrel-macos-x86_64 | 0.9.0 | 3.00 | 97.00 | 100.00 | OK | |
| r-oldrel-windows-x86_64 | 0.9.0 | 9.00 | 126.00 | 135.00 | OK |
Version: 0.9.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/6s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(duckspatial)
Important: 'crs_column' and 'crs' arguments are deprecated and will be removed in the next version.
If possible, use the default values of these arguments to avoid future issues.
> library(duckdb)
Loading required package: DBI
>
> test_check("duckspatial")
Reading layer `countries' from data source
`/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/duckspatial/spatial/countries.geojson'
using driver `GeoJSON'
Simple feature collection with 257 features and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -178.9125 ymin: -89.9 xmax: 180 ymax: 83.65187
Geodetic CRS: WGS 84
Reading layer `argentina' from data source
`/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/duckspatial/spatial/argentina.geojson'
using driver `GeoJSON'
Simple feature collection with 1 feature and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -73.52455 ymin: -52.39755 xmax: -53.62409 ymax: -21.81793
Geodetic CRS: WGS 84
Reading layer `rivers' from data source
`/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/duckspatial/spatial/rivers.geojson'
using driver `GeoJSON'
Simple feature collection with 100 features and 1 field
Geometry type: LINESTRING
Dimension: XY
Bounding box: xmin: 2766878 ymin: 2222357 xmax: 3578648 ymax: 2459939
Projected CRS: ETRS89-extended / LAEA Europe
v Temporary view view_test registered
Saving _problems/test-compatibility-28.R
i Table <rt_write_line> dropped
v Table rt_write_line successfully imported
Saving _problems/test-compatibility-63.R
v Temporary view rt_register_line registered
Saving _problems/test-compatibility-92.R
i Table <countries_from_file_compat> dropped
v Table countries_from_file_compat successfully imported
Saving _problems/test-compatibility-112.R
[ FAIL 4 | WARN 1 | SKIP 17 | PASS 3 ]
══ Skipped tests (17) ══════════════════════════════════════════════════════════
• On CRAN (17): 'test-db_read.R:2:1', 'test-db_register.R:3:1',
'test-db_write.R:3:1', 'test-ddbs_area.R:3:1', 'test-ddbs_bbox.R:3:1',
'test-ddbs_combine.R:3:1', 'test-ddbs_concave_hull.R:3:1',
'test-ddbs_convex_hull.R:3:1', 'test-ddbs_distance.R:3:1',
'test-ddbs_envelope.R:3:1', 'test-ddbs_generate_points.R:5:1',
'test-ddbs_interpolate_aw.R:2:1', 'test-ddbs_join.R:3:1',
'test-ddbs_length.R:3:1', 'test-ddbs_transform.R:5:1',
'test-ddbs_union.R:3:1', 'test-utils.R:2:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-compatibility.R:28:5'): Compatibility: Arrow Views behave like Persistent Tables ──
Error in `dbSendQuery(conn, statement, ...)`: Unknown column type for prepare: GEOMETRY
i Context: rapi_prepare
Backtrace:
▆
1. ├─duckspatial::ddbs_read_vector(conn, "view_test", crs = 4326) at test-compatibility.R:28:5
2. │ ├─DBI::dbListFields(conn, name_list$query_name)
3. │ └─DBI::dbListFields(conn, name_list$query_name)
4. │ ├─DBI::dbGetQuery(...)
5. │ └─DBI::dbGetQuery(...)
6. │ └─DBI (local) .local(conn, statement, ...)
7. │ ├─DBI::dbSendQuery(conn, statement, ...)
8. │ └─duckdb::dbSendQuery(conn, statement, ...)
9. │ └─duckdb (local) .local(conn, statement, ...)
10. │ └─duckdb:::rethrow_rapi_prepare(conn@conn_ref, statement, env)
11. │ ├─rlang::try_fetch(...)
12. │ │ ├─base::tryCatch(...)
13. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
14. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
15. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
16. │ │ └─base::withCallingHandlers(...)
17. │ └─duckdb:::rapi_prepare(conn, query, env)
18. ├─duckdb (local) `<fn>`("rapi_prepare", "Unknown column type for prepare: GEOMETRY")
19. │ └─rlang::abort(error_parts, class = "duckdb_error", !!!fields)
20. │ └─rlang:::signal_abort(cnd, .file)
21. │ └─base::signalCondition(cnd)
22. └─rlang (local) `<fn>`(`<dckdb_rr>`)
23. └─handlers[[1L]](cnd)
24. └─duckdb:::rethrow_error_from_rapi(e, call)
25. └─rlang::abort(msg, call = call)
── Error ('test-compatibility.R:63:9'): Round trip: write -> read for various geometry types ──
Error in `get_geom_name(conn, name_list$query_name)`: The table <rt_write_line> does not exist.
Backtrace:
▆
1. └─duckspatial::ddbs_read_vector(conn, table_name) at test-compatibility.R:63:9
2. └─duckspatial:::get_geom_name(conn, name_list$query_name)
3. └─cli::cli_abort("The table <{x}> does not exist.")
4. └─rlang::abort(...)
── Error ('test-compatibility.R:92:9'): Round trip: register -> read for various geometry types ──
Error in `dbSendQuery(conn, statement, ...)`: Unknown column type for prepare: GEOMETRY
i Context: rapi_prepare
Backtrace:
▆
1. ├─duckspatial::ddbs_read_vector(conn, view_name) at test-compatibility.R:92:9
2. │ ├─DBI::dbListFields(conn, name_list$query_name)
3. │ └─DBI::dbListFields(conn, name_list$query_name)
4. │ ├─DBI::dbGetQuery(...)
5. │ └─DBI::dbGetQuery(...)
6. │ └─DBI (local) .local(conn, statement, ...)
7. │ ├─DBI::dbSendQuery(conn, statement, ...)
8. │ └─duckdb::dbSendQuery(conn, statement, ...)
9. │ └─duckdb (local) .local(conn, statement, ...)
10. │ └─duckdb:::rethrow_rapi_prepare(conn@conn_ref, statement, env)
11. │ ├─rlang::try_fetch(...)
12. │ │ ├─base::tryCatch(...)
13. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
14. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
15. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
16. │ │ └─base::withCallingHandlers(...)
17. │ └─duckdb:::rapi_prepare(conn, query, env)
18. ├─duckdb (local) `<fn>`("rapi_prepare", "Unknown column type for prepare: GEOMETRY")
19. │ └─rlang::abort(error_parts, class = "duckdb_error", !!!fields)
20. │ └─rlang:::signal_abort(cnd, .file)
21. │ └─base::signalCondition(cnd)
22. └─rlang (local) `<fn>`(`<dckdb_rr>`)
23. └─handlers[[1L]](cnd)
24. └─duckdb:::rethrow_error_from_rapi(e, call)
25. └─rlang::abort(msg, call = call)
── Error ('test-compatibility.R:112:5'): Compatibility: Writing from file path and reading back ──
Error in `get_geom_name(conn, name_list$query_name)`: The table <countries_from_file_compat> does not exist.
Backtrace:
▆
1. └─duckspatial::ddbs_read_vector(conn, table_name) at test-compatibility.R:112:5
2. └─duckspatial:::get_geom_name(conn, name_list$query_name)
3. └─cli::cli_abort("The table <{x}> does not exist.")
4. └─rlang::abort(...)
[ FAIL 4 | WARN 1 | SKIP 17 | PASS 3 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.9.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘aw_interpolation.Rmd’ using rmarkdown
Quitting from aw_interpolation.Rmd:67-78 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get_geom_name()`:
! The table <temp_view_f2e030dd_10be_4c8d_bbde_7197d501368a> does not
exist.
---
Backtrace:
▆
1. └─duckspatial::ddbs_interpolate_aw(...)
2. └─duckspatial:::get_geom_name(conn, t_list$query_name)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'aw_interpolation.Rmd' failed with diagnostics:
The table <temp_view_f2e030dd_10be_4c8d_bbde_7197d501368a> does not
exist.
--- failed re-building ‘aw_interpolation.Rmd’
--- re-building ‘benchmark.Rmd’ using rmarkdown
--- finished re-building ‘benchmark.Rmd’
--- re-building ‘duckspatial.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘duckspatial.Rmd’
--- re-building ‘spatial_joins.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘spatial_joins.Rmd’
SUMMARY: processing the following file failed:
‘aw_interpolation.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.9.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [22s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(duckspatial)
Important: 'crs_column' and 'crs' arguments are deprecated and will be removed in the next version.
If possible, use the default values of these arguments to avoid future issues.
> library(duckdb)
Loading required package: DBI
>
> test_check("duckspatial")
Reading layer `countries' from data source
`/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/duckspatial/spatial/countries.geojson'
using driver `GeoJSON'
Simple feature collection with 257 features and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -178.9125 ymin: -89.9 xmax: 180 ymax: 83.65187
Geodetic CRS: WGS 84
Reading layer `argentina' from data source
`/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/duckspatial/spatial/argentina.geojson'
using driver `GeoJSON'
Simple feature collection with 1 feature and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -73.52455 ymin: -52.39755 xmax: -53.62409 ymax: -21.81793
Geodetic CRS: WGS 84
Reading layer `rivers' from data source
`/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/duckspatial/spatial/rivers.geojson'
using driver `GeoJSON'
Simple feature collection with 100 features and 1 field
Geometry type: LINESTRING
Dimension: XY
Bounding box: xmin: 2766878 ymin: 2222357 xmax: 3578648 ymax: 2459939
Projected CRS: ETRS89-extended / LAEA Europe
[gannet:291207:0:292044] Caught signal 11 (Segmentation fault: address not mapped to object at address 0x769)
==== backtrace (tid: 292044) ====
0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7fd897d9bdf4]
1 /lib64/libucs.so.0(+0x17aed) [0x7fd897d9daed]
2 /lib64/libucs.so.0(+0x17cbd) [0x7fd897d9dcbd]
3 /lib64/libc.so.6(+0x1a040) [0x7fd8b0629040]
4 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x116ae30) [0x7fcae8d6ae30]
5 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x113dea8) [0x7fcae8d3dea8]
6 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x754b84) [0x7fcae8354b84]
7 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x752f19) [0x7fcae8352f19]
8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x195) [0x7fd89c678f55]
9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7fd89c678cfa]
10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7fd89d467f61]
11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x9b) [0x7fd89dc8736b]
12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7fd89dc83f56]
13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x154) [0x7fd89dc83bc4]
14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7fd89dc7d940]
15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13TaskScheduler14ExecuteForeverEPNSt3__16atomicIbEE+0x39a) [0x7fd89dc8a59a]
16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1a9605c) [0x7fd89dc9605c]
17 /lib64/libc.so.6(+0x71f14) [0x7fd8b0680f14]
18 /lib64/libc.so.6(+0xf532c) [0x7fd8b070432c]
=================================
*** caught segfault ***
address 0x4d200047187, cause 'unknown'
Traceback:
1: rapi_execute(stmt, convert_opts)
2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])
7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})
8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))
9: duckdb_execute(res)
10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
11: .local(conn, statement, ...)
12: dbSendQuery(conn, statement, ...)
13: dbSendQuery(conn, statement, ...)
14: dbSendStatement(conn, statement, ...)
15: dbSendStatement(conn, statement, ...)
16: DBI::dbExecute(conn, "LOAD spatial;")
17: DBI::dbExecute(conn, "LOAD spatial;")
18: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage"))
19: suppressMessages(DBI::dbExecute(conn, "LOAD spatial;"))
20: duckspatial::ddbs_load(conn, quiet = TRUE)
21: ddbs_create_conn("memory")
22: eval(code, test_env)
23: eval(code, test_env)
24: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
25: doTryCatch(return(expr), name, parentenv, handler)
26: tryCatchOne(expr, names, parentenv, handlers[[1L]])
27: tryCatchList(expr, classes, parentenv, handlers)
28: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
29: doWithOneRestart(return(expr), restart)
30: withOneRestart(expr, restarts[[1L]])
31: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
32: test_code(code, parent.frame())
33: test_that("Compatibility: Arrow Views behave like Persistent Tables", { skip_if_not_installed("duckdb") conn <- ddbs_create_conn("memory") on.exit(ddbs_stop_conn(conn), add = TRUE) data_sf <- sf::st_as_sf(data.frame(id = 1:5, x = 0, y = 0, val = letters[1:5]), coords = c("x", "y"), crs = 4326) expect_no_error(ddbs_register_vector(conn, data_sf, "view_test", overwrite = TRUE)) expect_no_error(crs_out <- ddbs_crs(conn, "view_test")) expect_equal(crs_out, sf::st_crs(4326)) read_view <- ddbs_read_vector(conn, "view_test", crs = 4326) expect_s3_class(read_view, "sf") expect_equal(nrow(read_view), 5) ddbs_write_vector(conn, data_sf, "table_test", overwrite = TRUE) read_table <- ddbs_read_vector(conn, "table_test", crs = 4326) expect_equal(sf::st_drop_geometry(read_view), sf::st_drop_geometry(read_table)) expect_equal(sf::st_geometry(read_view), sf::st_geometry(read_table)) })
34: eval(code, test_env)
35: eval(code, test_env)
36: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
37: doTryCatch(return(expr), name, parentenv, handler)
38: tryCatchOne(expr, names, parentenv, handlers[[1L]])
39: tryCatchList(expr, classes, parentenv, handlers)
40: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
41: doWithOneRestart(return(expr), restart)
42: withOneRestart(expr, restarts[[1L]])
43: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
44: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
45: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
46: FUN(X[[i]], ...)
47: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
48: doTryCatch(return(expr), name, parentenv, handler)
49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
50: tryCatchList(expr, classes, parentenv, handlers)
51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
52: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
53: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
54: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
55: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
56: test_check("duckspatial")
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.9.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘aw_interpolation.Rmd’ using rmarkdown
[gannet:302277:0:303010] Caught signal 11 (Segmentation fault: address not mapped to object at address 0x1a4)
==== backtrace (tid: 303010) ====
0 /lib64/libucs.so.0(ucs_handle_error+0x2e4) [0x7fbaad9e4df4]
1 /lib64/libucs.so.0(+0x17aed) [0x7fbaad9e6aed]
2 /lib64/libucs.so.0(+0x17cbd) [0x7fbaad9e6cbd]
3 /lib64/libc.so.6(+0x1a040) [0x7fbac4128040]
4 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x116c8b0) [0x7facfcd6c8b0]
5 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x113dea8) [0x7facfcd3dea8]
6 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x754b84) [0x7facfc354b84]
7 /data/gannet/ripley/.local/share/R/duckdb/extensions/v1.5.0/linux_amd64/spatial.duckdb_extension(+0x752f19) [0x7facfc352f19]
8 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper29LoadExternalExtensionInternalERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEERNS_19ExtensionActiveLoadE+0x195) [0x7fb9e6678f55]
9 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb15ExtensionHelper21LoadExternalExtensionERNS_16DatabaseInstanceERNS_10FileSystemERKNSt3__112basic_stringIcNS5_11char_traitsIcEENS5_9allocatorIcEEEE+0x4a) [0x7fb9e6678cfa]
10 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZNK6duckdb12PhysicalLoad15GetDataInternalERNS_16ExecutionContextERNS_9DataChunkERNS_19OperatorSourceInputE+0x151) [0x7fb9e7467f61]
11 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor15FetchFromSourceERNS_9DataChunkE+0x9b) [0x7fb9e7c8736b]
12 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb16PipelineExecutor7ExecuteEm+0x146) [0x7fb9e7c83f56]
13 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12PipelineTask11ExecuteTaskENS_17TaskExecutionModeE+0x154) [0x7fb9e7c83bc4]
14 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb12ExecutorTask7ExecuteENS_17TaskExecutionModeE+0xa0) [0x7fb9e7c7d940]
15 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(_ZN6duckdb13TaskScheduler14ExecuteForeverEPNSt3__16atomicIbEE+0x39a) [0x7fb9e7c8a59a]
16 /data/gannet/ripley/R/test-clang/duckdb/libs/duckdb.so(+0x1a9605c) [0x7fb9e7c9605c]
17 /lib64/libc.so.6(+0x71f14) [0x7fbac417ff14]
18 /lib64/libc.so.6(+0xf532c) [0x7fbac420332c]
=================================
*** caught segfault ***
address 0x4d200049cc5, cause 'unknown'
Traceback:
1: rapi_execute(stmt, convert_opts)
2: withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }})
3: doTryCatch(return(expr), name, parentenv, handler)
4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
5: tryCatchList(expr, classes, parentenv, handlers)
6: tryCatch(withCallingHandlers(expr, condition = function(cnd) { { .__handler_frame__. <- TRUE .__setup_frame__. <- frame if (inherits(cnd, "message")) { except <- c("warning", "error") } else if (inherits(cnd, "warning")) { except <- "error" } else { except <- "" } } while (!is_null(cnd)) { if (inherits(cnd, "error")) { out <- handlers[[1L]](cnd) if (!inherits(out, "rlang_zap")) throw(out) } inherit <- .subset2(.subset2(cnd, "rlang"), "inherit") if (is_false(inherit)) { return() } cnd <- .subset2(cnd, "parent") }}), stackOverflowError = handlers[[1L]])
7: rlang::try_fetch(rapi_execute(stmt, convert_opts), error = function(e) { rethrow_error_from_rapi(e, call)})
8: rethrow_rapi_execute(res@stmt_lst$ref, duckdb_convert_opts_impl(res@connection@convert_opts, arrow = res@arrow))
9: duckdb_execute(res)
10: duckdb_result(connection = conn, stmt_lst = stmt_lst, arrow = arrow)
11: .local(conn, statement, ...)
12: dbSendQuery(conn, statement, ...)
13: dbSendQuery(conn, statement, ...)
14: dbSendStatement(conn, statement, ...)
15: dbSendStatement(conn, statement, ...)
16: DBI::dbExecute(conn, "LOAD spatial;")
17: DBI::dbExecute(conn, "LOAD spatial;")
18: withCallingHandlers(expr, message = function(c) if (inherits(c, classes)) tryInvokeRestart("muffleMessage"))
19: suppressMessages(DBI::dbExecute(conn, "LOAD spatial;"))
20: duckspatial::ddbs_load(conn, quiet = TRUE)
21: ddbs_create_conn()
22: ddbs_interpolate_aw(target = grid, source = nc, tid = "target_id", sid = "source_id", extensive = "BIR74", weight = "total", output = "sf")
23: eval(expr, envir)
24: eval(expr, envir)
25: withVisible(eval(expr, envir))
26: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)})
27: eval(call)
28: eval(call)
29: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers)
30: doWithOneRestart(return(expr), restart)
31: withOneRestart(expr, restarts[[1L]])
32: withRestartList(expr, restarts[-nr])
33: doWithOneRestart(return(expr), restart)
34: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
35: withRestartList(expr, restarts)
36: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE)
37: evaluate::evaluate(...)
38: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))
39: in_dir(input_dir(), expr)
40: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)))
41: eng_r(options)
42: block_exec(params)
43: call_block(x)
44: process_group(group)
45: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) })
46: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global()))
47: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc)
48: process_file(text, output)
49: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
50: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...)
51: vweave_rmarkdown(...)
52: engine$weave(file, quiet = quiet, encoding = enc)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
57: tools:::.buildOneVignette("aw_interpolation.Rmd", "/data/gannet/ripley/R/packages/tests-clang/duckspatial.Rcheck/vign_test/duckspatial", TRUE, FALSE, "aw_interpolation", "UTF-8", "/tmp/RtmpM8bjAw/working_dir/Rtmp8YFBVR/file49c935c6b62d9.rds")
An irrecoverable exception occurred. R is aborting now ...
--- re-building ‘benchmark.Rmd’ using rmarkdown
--- finished re-building ‘benchmark.Rmd’
--- re-building ‘duckspatial.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘duckspatial.Rmd’
--- re-building ‘spatial_joins.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘spatial_joins.Rmd’
SUMMARY: processing the following file failed:
‘aw_interpolation.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.9.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [15s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(duckspatial)
Important: 'crs_column' and 'crs' arguments are deprecated and will be removed in the next version.
If possible, use the default values of these arguments to avoid future issues.
> library(duckdb)
Loading required package: DBI
>
> test_check("duckspatial")
Reading layer `countries' from data source
`/data/gannet/ripley/R/packages/tests-devel/duckspatial.Rcheck/duckspatial/spatial/countries.geojson'
using driver `GeoJSON'
Simple feature collection with 257 features and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -178.9125 ymin: -89.9 xmax: 180 ymax: 83.65187
Geodetic CRS: WGS 84
Reading layer `argentina' from data source
`/data/gannet/ripley/R/packages/tests-devel/duckspatial.Rcheck/duckspatial/spatial/argentina.geojson'
using driver `GeoJSON'
Simple feature collection with 1 feature and 6 fields
Geometry type: POLYGON
Dimension: XY
Bounding box: xmin: -73.52455 ymin: -52.39755 xmax: -53.62409 ymax: -21.81793
Geodetic CRS: WGS 84
Reading layer `rivers' from data source
`/data/gannet/ripley/R/packages/tests-devel/duckspatial.Rcheck/duckspatial/spatial/rivers.geojson'
using driver `GeoJSON'
Simple feature collection with 100 features and 1 field
Geometry type: LINESTRING
Dimension: XY
Bounding box: xmin: 2766878 ymin: 2222357 xmax: 3578648 ymax: 2459939
Projected CRS: ETRS89-extended / LAEA Europe
v Temporary view view_test registered
Saving _problems/test-compatibility-28.R
i Table <rt_write_line> dropped
v Table rt_write_line successfully imported
Saving _problems/test-compatibility-63.R
v Temporary view rt_register_line registered
Saving _problems/test-compatibility-92.R
i Table <countries_from_file_compat> dropped
v Table countries_from_file_compat successfully imported
Saving _problems/test-compatibility-112.R
[ FAIL 4 | WARN 1 | SKIP 17 | PASS 3 ]
══ Skipped tests (17) ══════════════════════════════════════════════════════════
• On CRAN (17): 'test-db_read.R:2:1', 'test-db_register.R:3:1',
'test-db_write.R:3:1', 'test-ddbs_area.R:3:1', 'test-ddbs_bbox.R:3:1',
'test-ddbs_combine.R:3:1', 'test-ddbs_concave_hull.R:3:1',
'test-ddbs_convex_hull.R:3:1', 'test-ddbs_distance.R:3:1',
'test-ddbs_envelope.R:3:1', 'test-ddbs_generate_points.R:5:1',
'test-ddbs_interpolate_aw.R:2:1', 'test-ddbs_join.R:3:1',
'test-ddbs_length.R:3:1', 'test-ddbs_transform.R:5:1',
'test-ddbs_union.R:3:1', 'test-utils.R:2:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-compatibility.R:28:5'): Compatibility: Arrow Views behave like Persistent Tables ──
Error in `dbSendQuery(conn, statement, ...)`: Unknown column type for prepare: GEOMETRY
i Context: rapi_prepare
Backtrace:
▆
1. ├─duckspatial::ddbs_read_vector(conn, "view_test", crs = 4326) at test-compatibility.R:28:5
2. │ ├─DBI::dbListFields(conn, name_list$query_name)
3. │ └─DBI::dbListFields(conn, name_list$query_name)
4. │ ├─DBI::dbGetQuery(...)
5. │ └─DBI::dbGetQuery(...)
6. │ └─DBI (local) .local(conn, statement, ...)
7. │ ├─DBI::dbSendQuery(conn, statement, ...)
8. │ └─duckdb::dbSendQuery(conn, statement, ...)
9. │ └─duckdb (local) .local(conn, statement, ...)
10. │ └─duckdb:::rethrow_rapi_prepare(conn@conn_ref, statement, env)
11. │ ├─rlang::try_fetch(...)
12. │ │ ├─base::tryCatch(...)
13. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
14. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
15. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
16. │ │ └─base::withCallingHandlers(...)
17. │ └─duckdb:::rapi_prepare(conn, query, env)
18. ├─duckdb (local) `<fn>`("rapi_prepare", "Unknown column type for prepare: GEOMETRY")
19. │ └─rlang::abort(error_parts, class = "duckdb_error", !!!fields)
20. │ └─rlang:::signal_abort(cnd, .file)
21. │ └─base::signalCondition(cnd)
22. └─rlang (local) `<fn>`(`<dckdb_rr>`)
23. └─handlers[[1L]](cnd)
24. └─duckdb:::rethrow_error_from_rapi(e, call)
25. └─rlang::abort(msg, call = call)
── Error ('test-compatibility.R:63:9'): Round trip: write -> read for various geometry types ──
Error in `get_geom_name(conn, name_list$query_name)`: The table <rt_write_line> does not exist.
Backtrace:
▆
1. └─duckspatial::ddbs_read_vector(conn, table_name) at test-compatibility.R:63:9
2. └─duckspatial:::get_geom_name(conn, name_list$query_name)
3. └─cli::cli_abort("The table <{x}> does not exist.")
4. └─rlang::abort(...)
── Error ('test-compatibility.R:92:9'): Round trip: register -> read for various geometry types ──
Error in `dbSendQuery(conn, statement, ...)`: Unknown column type for prepare: GEOMETRY
i Context: rapi_prepare
Backtrace:
▆
1. ├─duckspatial::ddbs_read_vector(conn, view_name) at test-compatibility.R:92:9
2. │ ├─DBI::dbListFields(conn, name_list$query_name)
3. │ └─DBI::dbListFields(conn, name_list$query_name)
4. │ ├─DBI::dbGetQuery(...)
5. │ └─DBI::dbGetQuery(...)
6. │ └─DBI (local) .local(conn, statement, ...)
7. │ ├─DBI::dbSendQuery(conn, statement, ...)
8. │ └─duckdb::dbSendQuery(conn, statement, ...)
9. │ └─duckdb (local) .local(conn, statement, ...)
10. │ └─duckdb:::rethrow_rapi_prepare(conn@conn_ref, statement, env)
11. │ ├─rlang::try_fetch(...)
12. │ │ ├─base::tryCatch(...)
13. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
14. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
15. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
16. │ │ └─base::withCallingHandlers(...)
17. │ └─duckdb:::rapi_prepare(conn, query, env)
18. ├─duckdb (local) `<fn>`("rapi_prepare", "Unknown column type for prepare: GEOMETRY")
19. │ └─rlang::abort(error_parts, class = "duckdb_error", !!!fields)
20. │ └─rlang:::signal_abort(cnd, .file)
21. │ └─base::signalCondition(cnd)
22. └─rlang (local) `<fn>`(`<dckdb_rr>`)
23. └─handlers[[1L]](cnd)
24. └─duckdb:::rethrow_error_from_rapi(e, call)
25. └─rlang::abort(msg, call = call)
── Error ('test-compatibility.R:112:5'): Compatibility: Writing from file path and reading back ──
Error in `get_geom_name(conn, name_list$query_name)`: The table <countries_from_file_compat> does not exist.
Backtrace:
▆
1. └─duckspatial::ddbs_read_vector(conn, table_name) at test-compatibility.R:112:5
2. └─duckspatial:::get_geom_name(conn, name_list$query_name)
3. └─cli::cli_abort("The table <{x}> does not exist.")
4. └─rlang::abort(...)
[ FAIL 4 | WARN 1 | SKIP 17 | PASS 3 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.9.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘aw_interpolation.Rmd’ using rmarkdown
Quitting from aw_interpolation.Rmd:67-78 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get_geom_name()`:
! The table <temp_view_a1131990_5989_4b00_bcbb_8886aa5135f1> does not
exist.
---
Backtrace:
▆
1. └─duckspatial::ddbs_interpolate_aw(...)
2. └─duckspatial:::get_geom_name(conn, t_list$query_name)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'aw_interpolation.Rmd' failed with diagnostics:
The table <temp_view_a1131990_5989_4b00_bcbb_8886aa5135f1> does not
exist.
--- failed re-building ‘aw_interpolation.Rmd’
--- re-building ‘benchmark.Rmd’ using rmarkdown
--- finished re-building ‘benchmark.Rmd’
--- re-building ‘duckspatial.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘duckspatial.Rmd’
--- re-building ‘spatial_joins.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘spatial_joins.Rmd’
SUMMARY: processing the following file failed:
‘aw_interpolation.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc