FigureSclerosis     (Fig 1 of Fay, Brittain, Proschan, 2013.) Plots Kaplan-Meier together with several confidence interval for Nash et al data
FigureWilms     (Fig 3 of Fay, Brittain, Proschan, 2013.) Plots Kaplan-Meier together with 2 confidence intervals for National Wilms Tumor data
Simulation2013     Does most of Simulations for Fay, Brittain, Proschan (2013, Biostatistics, 723-736) (except unconstrained bootstrap). Actual simulations took over a week to run. See code to set number of reps.
SimulationBootOnly2013     Does Unconstrained bootstrap Simulation for Fay, Brittain, Proschan (2013). Requested by reviewer, and done after initial submission. 
NotesMMandMC       Script for producing the figures in the Notes on method of moments and Monte carlo methods for calculating BPCP.
Simulation2015     Simulations for Fay Brittain (2016, Statistics in Medicine, 2726-2740), which used monotonic option and included mid-p version. Took several days to run.
Simulation2025_discrete  Does discrete simulation for Fay, Mateja, and Grieco (2026, unpublished) parmtype='efflogs'
Simulation2025_discrete_difference  Same as SImulation2025_discrete except with parmtype='difference'
Simulation2025_discrete_summary   R markdown to summarize the results of the 2026 discrete simulation
Simulation2025_cancerdata Simulation based on cancer data (results not interesting and not used in Fay, Mateja, and Grieco, 2026)
Calculation2025_no_censoring  Calculation of coverage for the no censoring case in Fay, Mateja, and Grieco, 2026
PlottingTransformationFigures   Plot the transformation figures in Fay, Mateja, and Grieco, 2026


