d734f9d0634430c78c376a2a007dea54 *DESCRIPTION
eb6c022f2cae176dfd83e0a731e7de2b *NAMESPACE
149af14d19c775116f509688e642f4de *NEWS.md
fa9fa41e372833bcbdf11a021cb792f4 *R/data.R
15b515243a5e73d6a190e3ad9fecc951 *R/dimensionality_reduction.R
871f050e30b860fe1c011bc12a0ba4ee *R/dummy_proofing.R
b0b114fa9139e4b90ff4de757178e8b4 *R/dynwrap_integration.R
d361aadf558f4bab012a6060cba3e50f *R/extract_modules.R
0370ccaee9804d813336f96de293e3fd *R/gene_importances.R
21139684e7364f3406ce647d1a5a4b92 *R/package.R
77925daee369db41c3d3048b2f6e3595 *R/plotting.R
cd2a9d1fc36cb2e19ec16192d2a31e86 *R/scaling.R
0bb9b3bf795845a68dd137b660842b00 *R/trajectory_inference.R
24c054746c7c5ed96f6dccc3207a2774 *README.md
d099472a921b18b90eac98e769d07a90 *build/partial.rdb
f969d12a355d3730b904b59fbb2566d6 *build/vignette.rds
185be754adfcb71888fee9c4575e1253 *data/ginhoux.rda
f23995f38dfef1043accefe6bc0d1fda *inst/CITATION
f0c30ee4dd9d3e005878dcd658598d1d *inst/doc/anndata.R
ac8c54416a09343913b3af309cc76f7b *inst/doc/anndata.Rmd
09bef3ca22ded388c31baed0596c1b4f *inst/doc/anndata.html
1ccfaf611ae6e88254e268e1701c3e60 *inst/doc/ginhoux.R
184abad7127b1ba0a711128a7656209b *inst/doc/ginhoux.Rmd
b162d849005059a845f60abd00074293 *inst/doc/ginhoux.html
b335fbffd9a406b8548cb9a089288a2a *inst/doc/simulated-data.R
3d792e877a2c5832d1f35d04c8095183 *inst/doc/simulated-data.Rmd
d389d4308894d68b644272e0697d8fbe *inst/doc/simulated-data.html
a77f1ada3bfa6715488d665846771a79 *inst/doc/singlecellexperiment.R
81c49904a18ee10607181bdd7c6a1d08 *inst/doc/singlecellexperiment.Rmd
680a36ddc50340b251ac7cacd88a838a *inst/doc/singlecellexperiment.html
233829c5e085e9769d6779e960854710 *inst/dynwrap/definition.yml
5b3eb3bbf40c59118bf6a585ea08e819 *inst/dynwrap/example.sh
2f806d801665a295897ca6a1025be6ec *inst/dynwrap/run.R
70dd45c9397a3eec2a8a6dd6d1c851d5 *man/SCORPIUS-package.Rd
736c14cb90ced6b020b25c5fc77496ed *man/draw_trajectory_heatmap.Rd
d9f9a6ccbb839872a5bb99eb570cfc41 *man/draw_trajectory_plot.Rd
9c3b29be8ca27997f953aa6fed8db7cf *man/extract_modules.Rd
9e4f5d2ddda83e257223749bbf7eb67e *man/figures/README_infer_trajectory-1.png
07d2aac12a21bff67b4ff1ea61b7773e *man/figures/README_moduled_tafs-1.png
6dfa77928b58fe8a3cf76709ee2435e2 *man/figures/README_reduce_dimensionality-1.png
55a00ad28135a933090618ea254848e0 *man/figures/README_visualise_tafs-1.png
e9b6e9d2527a523f5558176b71918fd8 *man/gene_importances.Rd
d037b7b94de273a2e34628b300aafa56 *man/generate_dataset.Rd
c4057d0d110cd024229f593bbb0493b3 *man/ginhoux.Rd
dfabd167f7ff582b345fbb009e055dfa *man/infer_initial_trajectory.Rd
67510992f34b214bc3a7138b06a9c439 *man/infer_trajectory.Rd
f6d2d5fc8012206bf82b793451792586 *man/reduce_dimensionality.Rd
30e654062ffb1cf588c51240c2b58a35 *man/reexports.Rd
e75c1f76077640b194ae4f45d4923525 *man/reverse_trajectory.Rd
30e87de3888025a32505aa4919eeed71 *man/ti_scorpius.Rd
1c338a94cafdfebbdf03b4b6696b8d48 *tests/testthat.R
276a19b256538cad18a3cfc465f072ac *tests/testthat/test-data.R
52954f7529ea5c42f6f119681dfcf729 *tests/testthat/test-dimensionality_reduction.R
0cd7ab7adc02c603b31021751a43843a *tests/testthat/test-extract_modules.R
c7342997c645f4a1201e6997b3783d5b *tests/testthat/test-gene_importances.R
77a519a537a6ef6815d72b3bb4fe5721 *tests/testthat/test-scaling.R
89afdff50bc3d74aff13f34ae2a85b04 *tests/testthat/test-sparse.R
1b55d9ce933c1f9b7763fff4eef2d371 *tests/testthat/test-trajectory_inference.R
ac8c54416a09343913b3af309cc76f7b *vignettes/anndata.Rmd
184abad7127b1ba0a711128a7656209b *vignettes/ginhoux.Rmd
3d792e877a2c5832d1f35d04c8095183 *vignettes/simulated-data.Rmd
81c49904a18ee10607181bdd7c6a1d08 *vignettes/singlecellexperiment.Rmd
