8217fa3711ced6874b0c8f161cfac7ff *DESCRIPTION
1c5fb114d46fa0641b61b07ba8530259 *NAMESPACE
70a3e6d6bb70cdb13b9d986993ad56cd *NEWS
db7ba51f9c19b4c982607734daf9c9ca *R/HMMplot.R
a5213fbc85c01f25c9e2ba1a1757542a *R/RcppExports.R
f978e13e72f0d019967bd6b140bf63f3 *R/SSPlotter.R
1bf692644be52ea79814933c419803c6 *R/biofam3c.R
b00aa2725efdab1fdfe16a57c0e11f23 *R/build_hmm.R
d60e7c4a34adaf7f363621e23b9c7d56 *R/build_lcm.R
f0969e4bac67dd70c7ad0bf3cc4e5206 *R/build_mhmm.R
c42d34b5f5dd9d77c5c600f824bce860 *R/build_mm.R
f643324741944c358dda9ef9441dbca8 *R/build_mmm.R
f4d1a4e22f376f89937b06c6f4fd0481 *R/check_deprecated_args.R
b42283b5a005f5dedf6e1946586cbe07 *R/colorpalette.R
c501731291a9aa14d341e60442cbe0fd *R/combine_models.R
944b796fc86b75a4d14e6cdc1119f33c *R/estimate_coef.R
d8c0b1107f837e3a77a4c65610a02cef *R/fit_model.R
800812905769a74d2d15f963b34aa021 *R/forwardBackward.R
7576f537f3b81e5a3e4741a1d05c4262 *R/gridplot.R
24ab12fa4aab69eab041cdb0e9dbeb0b *R/hidden_paths.R
e9a202767bc83aebed76a38e87798dfe *R/hmm_biofam.R
ab2e784177d1d691fabad95439319d17 *R/hmm_mvad.R
496c8ac7809e2bac50d5a43cf376288e *R/import_seqdef.R
f74304ca8e2fb06d5934ee83bc8638ea *R/isColor.R
4bb7e5b0375c0522589eac22399da722 *R/logLik.hmm.R
8c19128629ef3989a691ff9403bb9d4d *R/logLik.mhmm.R
aec5ed442b0c4643f5acd5c16a52e0b6 *R/mHMMplotgrid.R
399675fa3ced2bc8150faf424e9e38f8 *R/mHMMplotint.R
982436a14dae3c5dfc1b6be0b2d1b473 *R/mc_to_sc.R
360c359f97d4f3bb0bf02e02676eccb1 *R/mc_to_sc_data.R
f678fdd2298abadf0ef822e95f1ba3cb *R/mhmm_biofam.R
d3982e5832836ccf9c5cc1fbc22f96db *R/mhmm_mvad.R
95d09cae853e048f7f43aa974e5be31a *R/mssplot.R
b88b40824a710508978d7fbdfaf5e73b *R/plot.hmm.R
1c8d41b669641f427fbd996ceb761757 *R/plot.mhmm.R
9aa6e2ec1701a9751742f19d4671829f *R/plot.ssp.R
01aadc3edf15fa027e5786dc5a219cc7 *R/plot_colors.R
e254b89da36f31f0530c886f03295136 *R/posterior_probs.R
1b34a268e69de66c179193c1d15896ab *R/print.hmm.R
bb251626065bd2b982524ff6fc10ae59 *R/print.mhmm.R
1ee30703cd7779651aecca4dcb10a181 *R/print.summary.mhmm.R
b132037d5958d8f623d81b9eb56250d5 *R/separate_mhmm.R
3afdbcedddea2a60142d90f99511e0b0 *R/seqHMM-deprecated.R
d70d06cb67ed61539925d0d9dec89915 *R/seqHMM-package.R
cdf7c1209528a958168f9c16b03b6f36 *R/simulate_hmm.R
269678c8ad8b91adf3f821223c318c37 *R/simulate_mhmm.R
18794c287dc840452d948e9ae372c225 *R/simulate_pars.R
d89f049fad615c06487b2f3ce9056d37 *R/spread_models.R
d9ee1d84b01d5d248394689ef2161f3c *R/ssp.R
d5e62b91e0633ee50f48c5b999249164 *R/ssplot.R
3f88d77c39dc280e6111711c513e80dd *R/ssplotM.R
9436feabbdcc5d2a701449aa8c68ac77 *R/summary.mhmm.R
0a8f8d4c287368444e0ac6bb418bed01 *R/trim_hmm.R
b3707ff2f8a3d3060d4accd5ca5105fd *R/vcov.mhmm.R
d8a6556b4f395f825fe8f881ded3efdf *R/zzz.R
5ef1f496cd88cfdc12d703f03f83aef3 *build/vignette.rds
24d8098b9e16c0fd497d674af8c740c9 *data/biofam3c.rda
07df3b55fd8db67073a1d34aaa35630e *data/colorpalette.rda
dd187977cf5880d446b623d1c8982a88 *data/hmm_biofam.rda
fd3c82e79109fd44a48e6d07597f4d19 *data/hmm_mvad.rda
57777ad97b24b5d51d3495527525dbc0 *data/mhmm_biofam.rda
3889dcd736e00a5e199e246dfc5a2f9b *data/mhmm_mvad.rda
e098093f930ccc2fe3efff37b06d0a0e *inst/CITATION
60ff1a64048dcb31aebb9926f9dd88a7 *inst/doc/seqHMM.R
24c5ce32755a2e64bc6c27921379ca5f *inst/doc/seqHMM.Rnw
fb638efe42e1747437ef45a4b0bccf8a *inst/doc/seqHMM.pdf
dd9f06c2b7ed111820a81bb3c50d0d2b *inst/doc/seqHMM_algorithms.Rnw
357d2309d165fb82f79bac55c6582afb *inst/doc/seqHMM_algorithms.pdf
d20513890839823241bd1d2d4e14f8ef *inst/doc/seqHMM_estimation.Rnw
10b2d7cf0d2de96b3966ab406b53c1dd *inst/doc/seqHMM_estimation.pdf
939dc60709f4a9f76b262aad9b4df2a4 *inst/doc/seqHMM_visualization.R
60848cbcd784503c8ac3e6a5172cc06c *inst/doc/seqHMM_visualization.Rnw
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352fe7097a4aff75bc41d249e4a218d5 *man/TraMineR_imports.Rd
8fb0c8eec640dc5e8ca8900e33df3f5d *man/biofam3c.Rd
30d889294d7e7fc4298302af441f6acd *man/build_hmm.Rd
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30724ec3146f746ee36d055862fde0a4 *man/build_mhmm.Rd
9bf7bb73f9e4a9527e83497c7ead28bb *man/build_mm.Rd
b6015bc7603e08859bb86d4afb72e0ee *man/build_mmm.Rd
af62da317ef1f97b95cdf2a9946ee284 *man/colorpalette.Rd
d6ddf358aef3b23a0b2c60e3fb578f02 *man/estimate_coef.Rd
4429920a7be4c59489b7c48f18ef85f1 *man/fit_model.Rd
dc1606c7ceba8f24162f3d5683a409b1 *man/forward_backward.Rd
3dee2de4b42ef208ced0dc4a86911a5f *man/gridplot.Rd
1b416193366662c75a37f4dadb2bb64a *man/hidden_paths.Rd
ef188c4d3a996d44fcedc0e81b72ac4d *man/hmm_biofam.Rd
1f0d7972e66be33316666d6e57da4fe1 *man/hmm_mvad.Rd
43c67369e80827bd2f407a3b181519cd *man/logLik.hmm.Rd
11142661d0fb13129cd85c8df5a17bba *man/logLik.mhmm.Rd
1d7d44662661196465259b31cb51a832 *man/mc_to_sc.Rd
2353151babce9427aa2c0bef9971ef11 *man/mc_to_sc_data.Rd
7685cf8518380956ab87a458c803884c *man/mhmm_biofam.Rd
48c8995ae857e85108f6516ad40bf92f *man/mhmm_mvad.Rd
285b1ca7ead8d703bfe661cf28e26df0 *man/mssplot.Rd
bc9a97aec299c0b495e7fa95a23ccafa *man/plot.hmm.Rd
78a71b4af5de7f6cfe02eca06a754b66 *man/plot.mhmm.Rd
333039ecb9bdcd8635b916a66aa7d97b *man/plot.ssp.Rd
0d79a316cd389e1ed521d1af4a8ea669 *man/plot_colors.Rd
215f4ef8ddc6802b97e7eecafd7cdbbf *man/posterior_probs.Rd
41f568ffd63482a8f155f7d0de32ef6e *man/print.Rd
be0c81c7d477e3359d22738ec19ddaa0 *man/separate_mhmm.Rd
471a36e7a651aa8a22bbe98d1d638c6b *man/seqHMM-deprecated.Rd
340f5d42474d5cb81c0ffeff6b4d9352 *man/seqHMM.Rd
097603130069983ab9dc3a965f3d9030 *man/simulate_hmm.Rd
f7f743a337537ae5e73b946509058aa6 *man/simulate_mhmm.Rd
5fbc2c42cda8e1ff4f513543b3245ff2 *man/simulate_pars.Rd
1a67dba4932a81490ebc7f2278712c75 *man/ssp.Rd
a0d9c185de46b956c62ed1af56748981 *man/ssplot.Rd
f94db2b411ffe63678c8c3dce9f16204 *man/summary.mhmm.Rd
490203554212bedb2b55a907c3adf767 *man/trim_model.Rd
f5a26d07aa3ec01a0572c0680e5f0d65 *man/vcov.mhmm.Rd
80d4c3f404bf217eee1a0583cc46823b *src/EM.cpp
e783708374cbc667aef70991e72a08d8 *src/EMx.cpp
9ae100fdd0b23ebcdaefe1704a0077ff *src/Makevars
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20c1252bca0be69e1de313a28e55e834 *src/forward_backward.h
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3f79087feea85b300ce72675d7b4c8aa *src/forwardbackwardx.cpp
0447b58a8a9e79a15a602263b3528b49 *src/internalBackward.cpp
124765753caaf4109ac6afd0df7ea4e5 *src/internalForward.cpp
fc106ba3b4db61b0b0307b19c7026262 *src/logLikHMM.cpp
7624b73a47eb901e5d971799aa7453a0 *src/logLikMixHMM.cpp
ea9f081247bf5736810800c1022a418b *src/logSumExp.cpp
67eb40ad0a49a39ab3f6f1781c741953 *src/log_EM.cpp
cfb01511e23dad5b64e4e44cc60427c2 *src/log_EMx.cpp
4484c730f61a62737e2ee613d9b821ec *src/log_forward_backward.h
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9f2a3798a1c8ae8283f5519c53831668 *src/log_internalBackward.cpp
ea2592a72a6f94c6b5a8c29bc1341ff2 *src/log_internalForward.cpp
f9373bd8928d57b8c46808acac881240 *src/log_logLikHMM.cpp
266a2c281514dde17739b33567a8be19 *src/log_logLikMixHMM.cpp
cd838496924c19ac10e79c5605c30712 *src/log_objective.cpp
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141e4fcd4497604cbdc4523f12861183 *src/log_optCoef.cpp
7621a0c59fe10be93c3d0138953e1e9f *src/logsumexp.h
1b75a0e5d8d767659a06a1fb4d83bf5f *src/objective.cpp
4f5e29adc08a9f2d2eb08b7bc7c330c3 *src/objectivex.cpp
624f7a9e118f68efbc0e622c5ddd38a7 *src/optCoef.cpp
3e0a6f1b95933f128a1c818c9d24a1a5 *src/optcoef.h
df8bbdce2e4261696bf145f8e561a4f6 *src/reparma.cpp
b7005c66c1530bd3e0761c5e50db2121 *src/reparma.h
0238f430ed8b5f90c98d043b89da01ea *src/sa_opt_coef.cpp
299120588f91cf4eb31737f4b6f039e1 *src/seqHMM.h
9726182edf6db7d7697a8c65a5995dbd *src/uv_forwardbackward.cpp
47b684c7b2f2cb87e271a8ad9b4bce8c *src/varcoef.cpp
845ee1e5b0703dfdaa79cef03f7204e9 *src/viterbi.cpp
bb3602bc32ef536424511175aa46d72d *src/viterbix.cpp
b647b95ed7ccf24aa4d06362db2bb1ad *vignettes/references.bib
aeacf2ebeebc21c15c98285cc5ff272a *vignettes/references_for_vignettes.bib
24c5ce32755a2e64bc6c27921379ca5f *vignettes/seqHMM.Rnw
dd9f06c2b7ed111820a81bb3c50d0d2b *vignettes/seqHMM_algorithms.Rnw
d20513890839823241bd1d2d4e14f8ef *vignettes/seqHMM_estimation.Rnw
60848cbcd784503c8ac3e6a5172cc06c *vignettes/seqHMM_visualization.Rnw
