b02ac85c5e4343d2c19deaa2fb4fd7e8 *DESCRIPTION
d6ff32e86371ef26ca63914abfe1a6de *LICENSE
73f19ac4a6846b895bbd4ee947d616e4 *NAMESPACE
2aca0605d95f52b677898cbbcf1ba5cf *NEWS.md
340a29c3a5b7bdbd45a0edb33b8e1d15 *R/authenticate.R
db57367a4ae8a519935526f08ccd8fb9 *R/by_database.R
f3e85507e88e877b23f2033fd2b85955 *R/by_genes_or_panel.R
dbe618a68454974b74eb4b2f70b61271 *R/by_patients.R
debd2470cfcb17f20aeff6afb0f3421a *R/by_samples.R
710c053f701f8ac01c30f2dc49c6f977 *R/by_studies.R
31090b01a05bd044cc36f9d5717b2f16 *R/cbioportalr-package.R
968b1055d9968a8917b3473ebc904ee8 *R/cbp_api.R
94999415de748448f3e082ea70421e5d *R/data.R
40a13fa71e93248e1969f6626149dc05 *R/genomics_by_sample.R
b01c7dae511a2676cb00e92f7ea1bb01 *R/genomics_by_study.R
c6b31a0fdfaefeb134ecec34036bd33e *R/utils-pipe.R
2f7f449f9ed725c8c75bba70ace835b0 *R/utils.R
fca5f27c083abc0b046bee0586c9857d *README.md
0c6ad5b3446721162c89589e8077ab1c *build/partial.rdb
31fb388374fd484dcc0b1fbb673eed35 *build/vignette.rds
2342db135a9be411121bc56e3d81766b *data/impact_gene_info.rda
75cab43f8eb7344531b5fd991bbdea1f *inst/WORDLIST
42272f947d9c7b2ffd0bebba6b1b1ec9 *inst/doc/internal-structure.R
09f5c7fc0c325f146472aa5106893c87 *inst/doc/internal-structure.Rmd
d4b9cc521f4d66af851ca6ab25755f24 *inst/doc/internal-structure.html
25273b5dbac088d11f9d5bc5c4da660a *inst/doc/overview-of-workflow.Rmd
4a65e674c4cfdddf05c9b6a9e61d96e0 *inst/doc/overview-of-workflow.html
5ee5e3e8617fa5f1be2545774bbd2192 *man/available_clinical_attributes.Rd
85411a054167dff0fe72622111fec415 *man/available_gene_panels.Rd
c1455b322f34acea2eb8f31c8135f582 *man/available_patients.Rd
ed6fd7c5fe8f4cb7bf6826e87f929030 *man/available_profiles.Rd
4836c869e1f26eae7ef7ce278a7083e6 *man/available_samples.Rd
563dfab255cc939203473a37da1b1f06 *man/available_studies.Rd
9ac17741483c3878e1a2c2608c6ddb10 *man/cbioportalR-package.Rd
cd3401f5fcfe70d5ecfadbd74c1b2722 *man/cbp_api.Rd
26d36693bb9a435f3ae0523a515f607f *man/dot-get_clinical_by_list_item.Rd
380b4bcfa3528b9112746a63637eec73 *man/dot-get_clinical_pat_by_list_item.Rd
6e32cf5d90006f4e5e0e35adf3a32684 *man/dot-get_data_by_sample.Rd
0502accf487ce131d49233eb1595e62a *man/dot-get_data_by_study.Rd
f4fbc8ca84baa6baac0e8b007d34d7fd *man/figures/cbp-diagram.png
099a1217aa1fd064893b01198b51897e *man/figures/html_object.html
97b4770c0d76c1ef753379afce5b743e *man/figures/logo.png
4e5e0f6a7c9c912d6d579afbc6f8acc1 *man/figures/readme-cbp-diagram.png
f634a0681343afaefb41f97ffbeaee76 *man/figures/svg-cbp-diagram.svg
c58a270f0260cd112629c406b8aae3b1 *man/figures/svg_object.svg
717f6bb78d7a346ce47da503399091d1 *man/get_alias.Rd
20670d679a67d17f329aa50345f6296c *man/get_cbioportal_token.Rd
ba2b89f0ded4cee88d01e1ff7866c203 *man/get_clinical_by_patient.Rd
c0b22c7ff9050cc5f514aff9f05be309 *man/get_clinical_by_sample.Rd
e56385e0dcc908a1ba5ac40f2d3266f2 *man/get_clinical_by_study.Rd
800685fd6bd19ce211bd0c16adba5762 *man/get_cna_by_sample.Rd
b54bffce124b4bb59e1f22c60853d864 *man/get_cna_by_study.Rd
e697d4ad504c74b168f72c31f2a2bb04 *man/get_entrez_id.Rd
fd269df64ffd69b03d738998f0be9b6d *man/get_fusions_by_sample.Rd
e4a6ed7fb3d988479a6e817221525c4d *man/get_fusions_by_study.Rd
0fcd395c6c6dc3550cff780e5fd22c68 *man/get_gene_panel.Rd
0e6c10419d491e21b950fad69603918f *man/get_genes.Rd
5581f32935a86cfbfc11faef456200d4 *man/get_genetics_by_sample.Rd
648371b9445fdaa463bf99e345987322 *man/get_genetics_by_study.Rd
8a11277b576159c50f6d1a89a27517b4 *man/get_hugo_symbol.Rd
63906406d8838d79672df985573688d5 *man/get_mutations_by_sample.Rd
5c8d58804c8e0d621e8dbf331a7eb609 *man/get_mutations_by_study.Rd
bbd267af5eeffc9903f76f9c0bcc5b47 *man/get_panel_by_sample.Rd
706de03b9cb15a55a8b1f298cf903090 *man/get_samples_by_patient.Rd
a3dab9f68275fa2b2a1e54fc6d586008 *man/get_study_info.Rd
14f77f7e0ca6069df4c254d2f2a36c79 *man/impact_gene_info.Rd
da0f3385ef6f4902c87c367bc83517c0 *man/null-default.Rd
cb53cf15b7420f44d43678a24bbdbe6a *man/pipe.Rd
7692b10407bf9f8206be4a7ccd195d0c *man/set_cbioportal_db.Rd
2d38d82cebf0f2e48a3ff4578cb03a7f *man/test_cbioportal_db.Rd
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
9fb4529526b04872316eb46d6169e60b *tests/spelling.Rout.save
d7ebc0946a007833f2dc17ec2026c863 *tests/testthat.R
a819823861405a5d944f4bac69692d6e *tests/testthat/test-authentication.R
dc786c6394c971a5ce5bd44a3b224072 *tests/testthat/test-by-db.R
bfcd1fb3c8b7b4077077d978dac74c77 *tests/testthat/test-by-patient.R
13ea1eace3b3372bd68547038481bcea *tests/testthat/test-by-sample.R
2fa7834067c3cbf3df76e16f1dc8542f *tests/testthat/test-by-study.R
99cafe4666237ffa6a59448d8d643554 *tests/testthat/test-cbp_api.R
28ddb52c890bacb0a90939bce99450ec *tests/testthat/test-genes.R
72b8fc328865399257b7471818286ac2 *tests/testthat/test-genomics-by-sample.R
31d83d30c44704480632537f9c9e2771 *tests/testthat/test-genomics-by-study.R
09f5c7fc0c325f146472aa5106893c87 *vignettes/internal-structure.Rmd
25273b5dbac088d11f9d5bc5c4da660a *vignettes/overview-of-workflow.Rmd
ed44a02ffb49f5db6101093c52fca6b4 *vignettes/precompile.R
