c5f8fb72c485f8b9de0c8f9c1d9c24b7 *DESCRIPTION
bd284c59e3ecb61d4c4d8d20e5cf1b88 *NAMESPACE
ae6d8df8ef07aa5b9fb45f2d2fbe478d *R/benchmarkIncidencePrevalence.R
ab1c0bbc56fd677a42a33578a54b2e4a *R/bindEstimates.R
52b4f79dfafe2955cec52f22a6ab3659 *R/estimateIncidence.R
3614a07483424678698ecf6adadf2205 *R/estimatePrevalence.R
bdbe96293bb649c121bae1056b493ec1 *R/exportIncidencePrevalenceResults.R
fcf8c06cbc64c2263121304180853c84 *R/generateDenominatorCohortSet.R
a841dc00090a6c657684fe14539a9758 *R/getDenominatorCohorts.R
3b556be283b37b05e825298e14444329 *R/getIncidence.R
5c97efae71c7f982c2336b4a22403ec9 *R/getPrevalence.R
21a9f702eb3955d3f97e6c4866a2b06b *R/getStudyDays.R
e9536d8dc707669f2de1af958065a0f2 *R/incidencePrevalence-package.R
b1d34b7c183f869bd12698d5f9d449ac *R/inputValidation.R
a727999dc75c51c877b2907d30d303cd *R/mockIncidencePrevalenceRef.R
a56d8cf908dc08d526877bea58ef4179 *R/obscureCounts.R
370ddd2a8e318b39aa78b5bccab91178 *R/plotting.R
1311f2b792b1384edf8f34cfff8d5f0e *R/recordAttrition.R
cf794928715019cf81bd51d467156178 *R/utils-pipe.R
a155c6c7bb4ebb1d50cf7b364620b09a *R/utils.R
8ebbc5ca8ebc4ca5fde55495af413a2c *README.md
51b852b8fab8fed5dcc6feb92e52a6dc *build/vignette.rds
227b706eccd20b194b10f22549e09395 *inst/WORDLIST
9526cf9e65e65c57174a9df11a1ab764 *inst/doc/a01_Introduction_to_IncidencePrevalence.R
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3feffdf1e26ee1e8673739e6af523b79 *inst/doc/a02_Creating_denominator_populations.R
405041808d494ed4df37fb7e15815af0 *inst/doc/a02_Creating_denominator_populations.Rmd
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268026bcac39fa831ef91186afe5af87 *inst/doc/a03_Creating_outcome_cohorts.html
9ff2f2f46386adb142349e96b97584da *inst/doc/a04_Calculating_prevalence.R
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1efc5f34b9621befdc8f457cc1940456 *man/IncidencePrevalence-package.Rd
0ba9f2e7f74619952441f86287fe5302 *man/benchmarkIncidencePrevalence.Rd
c535569673bdc616623cdf3da80537e3 *man/bindIncidenceEstimates.Rd
8305db6a17bba73723ff62a85e664cba *man/bindPrevalenceEstimates.Rd
a6f696c73e54e0497ee2848bc32e8238 *man/estimateIncidence.Rd
34b5c820f4458e9dbd3b0918c4532066 *man/estimatePeriodPrevalence.Rd
e64d211fc51e23023aec5cffa8b708c1 *man/estimatePointPrevalence.Rd
8f44eb54f746218e1e0dc84f046fa831 *man/exportIncidencePrevalenceResults.Rd
48a573a5113ac4a5b75c2a4031594ed4 *man/figures/hexsticker.png
021c993a55ad8be6a45f023ebd965b8e *man/generateDenominatorCohortSet.Rd
885a1223f6871b567bb0f9ecacb32b65 *man/incidenceAttrition.Rd
f3ce0f6d92106add0caadfde1c1afed3 *man/incidenceSet.Rd
d9502a8b495f40f48d2dafe30db725a5 *man/mockIncidencePrevalenceRef.Rd
76d90157812a4aff34cf8680f4aab27d *man/participants.Rd
29ee7383caa7fc8c14f52bd035509064 *man/pipe.Rd
7a5d771938f23e3e063db54a85cf98c4 *man/plotIncidence.Rd
9c06c5b13ca90293615a2227bb78d927 *man/plotPrevalence.Rd
6a42b1f767dcbbe141fd7610faa22f4e *man/prevalenceAttrition.Rd
c9e713bce4c0b3a19f7de00493e49dab *man/prevalenceSet.Rd
2f7c1ff89abe262eea81c390c5b432ae *tests/manual/README.md
581f9c232865100cb9bee5f87b6111dc *tests/manual/test-dbms.R
c87bbc0907d13349f888ec782ebe412f *tests/manual/test-eunomia.R
80372f53de4373ac2d61434b9f3822be *tests/testthat.R
1414fa662779a4d6ef0a50a1cccb9875 *tests/testthat/test-benchmarkIncidencePrevalence.R
60d14529152e4721d04b3a9866a7d1b2 *tests/testthat/test-bindEstimates.R
6eb307f11c34326a02b8751414a5642d *tests/testthat/test-estimateIncidence.R
8bab2d994cb0ce53f6a0a2c3e2a0cd17 *tests/testthat/test-estimatePrevalence.R
0fdf82c17c7660f338bdd7426f6be42b *tests/testthat/test-exportIncidencePrevalenceResults.R
46072404d3f96c5ba20668f938f7bc5f *tests/testthat/test-generateDenominatorCohortSet.R
f50c5bbc29ce245e63e465644fb65bdf *tests/testthat/test-getStudyDays.R
ea3b3fcc64d15219ce35c4dc6d191848 *tests/testthat/test-mockIncidencePrevalenceRef.R
f38d5fb7468426f13d6aadf44bfecc90 *tests/testthat/test-obscureCounts.R
4ba55190b292ba37a77140bf3f428c36 *tests/testthat/test-plotting.R
61028735b6f3b637484b4a4ca75f38b5 *tests/testthat/test_should_fail/test_database_result_1_2023_10_04.csv
5c47bc3531c7e9da0c8f39acc001eade *tests/testthat/test_should_fail/test_database_result_1_2023_10_17.csv
3fac67d8ff22eda3cb6e001a252f238b *vignettes/a01_Introduction_to_IncidencePrevalence.Rmd
405041808d494ed4df37fb7e15815af0 *vignettes/a02_Creating_denominator_populations.Rmd
e284e41c4463e982c1cc0d06d153559a *vignettes/a03_Creating_outcome_cohorts.Rmd
774de93a7f1c1d035a29e4d0c44ee858 *vignettes/a04_Calculating_prevalence.Rmd
805ec139aab1ee72ac71fc72d8e032c3 *vignettes/a05_Calculating_incidence.Rmd
cdae2641683aded95cec6dad94841a6e *vignettes/denominator_pop_inclusion_fig1.png
6f8a8e6e770268ba412a398f7d2e118c *vignettes/denominator_pop_inclusion_fig2.png
00795028114b0238ae6998e51bf084d7 *vignettes/denominator_pop_inclusion_fig3.png
012fa3b32f988f280bc6802496b39a3b *vignettes/dpop1.png
30f1fab5decb81c3d47481e9de1f55b3 *vignettes/dpop2.png
f905c6b05ad4ec1e511d972986e92e05 *vignettes/dpop3.png
130b79294f59e7ca03e6bc91dc8e78cf *vignettes/dpop4.png
bd75bc03a34508656583cf073c17de02 *vignettes/inc_no_rep_no_washout.png
2a4e213fe56e0fb66bf2533e0d6457ad *vignettes/inc_no_rep_some_washout.png
6c7877619553646b18857d85e7714852 *vignettes/inc_no_rep_washout_all.png
72c0b255131e7bc6c5292ea1e66bfaeb *vignettes/inc_rep_some_washout.png
c3ecb2014b92d9353d01119f6203b5d2 *vignettes/mock_db_fig1.png
18c6ac379e28ea9ff18a25014fe8ed5e *vignettes/mock_db_fig2.png
80994edc140d40662fe44ca3c54162a3 *vignettes/mock_db_fig3.png
38ac974e5a58d33e44cd0359772777a0 *vignettes/numerator_pop_fig1.png
91dfebce43f482f12b1e305ff6514a05 *vignettes/numerator_pop_fig2.png
12ed94210ae9a969b70a96732cb4aabb *vignettes/numerator_pop_fig3.png
40f22b3509fcfbfaac7f119ddd7bf164 *vignettes/period_prev.png
b5ca590df13f2a24e321bfa48a275655 *vignettes/point_prev.png
