057b306d6f4a3aa163bbbae0b89501fb *DESCRIPTION
8d8e85899077c4f96f425fffb7bb39b5 *NAMESPACE
7c853dacac165d671668b0df8997d148 *NEWS.md
399601f5c6b6c4a3ad92e9dcc374753c *R/GPAV.R
59e4e1ce9d55be1a5eed18dd01d165f1 *R/HTD.R
e095ee53e5c6680ec5728baabab665d5 *R/IO.fun.R
234796918b4061b50799ea0c32966c16 *R/TPR-DAG.R
47290ef2a9b06cb6ebfa51a78fc55447 *R/graph.utility.R
01558123d0dd322582bc3fa32f6c2833 *R/heuristic.methods.R
175e911c8e83083223600fbabb3f3546 *R/norm.fun.R
6ce25e34f48ea12b9700d489e53db5da *R/perf.meas.R
5328ce1a68fc5263ede1e8be4f23107c *R/pkg.attach.R
5a978cdabb62decb99d9b6610640d6de *R/pkg.import.R
43328fa551e8065e4d3c5da2b6e55ec0 *data/graph.rda
29f9d7a6477e2472d64779231a2c867e *data/labels.rda
b38c67e9118b338a34a4f67284fed863 *data/scores.rda
8a1a6c2671b3af583bf39bc32c10698d *data/test.index.rda
a6784be6fba1850db1a693ecd6b44e17 *data/wadj.rda
231deecd6cdc3aaf9c031bcf8e8ee443 *inst/CITATION
449939248fed6876310761581640024e *inst/HEMDAG_2.6.0.pdf
c37989d9385b1fff8267bd23b6606437 *inst/extdata/edges.txt.gz
f44bbfa43dd7fe005386a17edca4011c *inst/extdata/gene2pheno.txt.gz
5d5105e3f14e98178c3586e12283d442 *inst/extdata/graph.edges.txt.gz
ad0c193c6bbe1338e1d29174304dbdd7 *man/AUPRC.Rd
f57373ecc1cafe83eaa7b90cadff027b *man/AUROC.Rd
dc0eea0d24aaafb009ef4f1c9b42a4d2 *man/Do.GPAV.Rd
eac908bae111c937d9b610e318c386fa *man/Do.GPAV.holdout.Rd
4d990803193519db006d3dfb0faad169 *man/Do.HTD.Rd
ba7fdf860cdd90abe50a30c3f80ee354 *man/Do.HTD.holdout.Rd
7924a3952e18fc74a0fbd5eac66255fc *man/Do.flat.scores.normalization.Rd
97493b9a321d5352ae29b56eea4ee233 *man/Do.full.annotation.matrix.Rd
5c34f1ed6a4f068d549813350ed74a35 *man/Do.heuristic.methods.Rd
90fac6d9b60626b2d517dfc0dceb4b8a *man/Do.heuristic.methods.holdout.Rd
06320c5ddf93b023fb05f32004966ec2 *man/FMM.Rd
5be5c0687480267256a3ae2ee7111e9f *man/GPAV.Rd
18e425248185809415df81174ceed251 *man/GPAV.over.examples.Rd
26360b6bc1034821eb37d318b47e5c35 *man/GPAV.parallel.Rd
2051036b1527e42f722288e37ff27d1a *man/HEMDAG-package.Rd
9854dc1373ace50ac6a26ae8e6605fbe *man/HTD-DAG.Rd
5ba657da775481b5a3c1497296f18ae2 *man/Heuristic-Methods.Rd
db867ad84ea7b0cfb172c31629fe04ba *man/Multilabel.F.measure.Rd
956ec604432f82ec49dc2003c5ae84f0 *man/PXR.Rd
46cc7b7fa88462b6beee00838646a3dc *man/TPR-DAG-cross-validation.Rd
fb515c90f39f7d93682679f20000dd19 *man/TPR-DAG-holdout.Rd
166e74b893384408f010ae6225c66b3f *man/TPR-DAG-variants.Rd
e25706f0a6e7f2ed95088cd0b1eb890e *man/adj.upper.tri.Rd
0e7790f6a259feb3ac1a65c8ae778437 *man/ancestors.Rd
a467906b57988b271113033f0a136f9f *man/build.consistent.graph.Rd
6b5f79f6c6e2df64e0fdb4aef2e55ae8 *man/check.DAG.integrity.Rd
8354efbc247cce88d04194991bf1694c *man/check.annotation.matrix.integrity.Rd
a626318f068eb19b87582e2cd5c7465b *man/children.Rd
a5412f2668dc16d523e5acd229604247 *man/compute.flipped.graph.Rd
97d1de66bb4335f26eee32e6638b29db *man/constraints.matrix.Rd
8cbae60e9bd7e8a63e64c95ca2c66ed2 *man/create.stratified.fold.df.Rd
a305cc5a2f8f702351467964e24022aa *man/descendants.Rd
39dfdf20058aa0aedd4507062c400562 *man/distances.from.leaves.Rd
0b0555848d5c85a031e1ba64aa8667af *man/do.edges.from.HPO.obo.Rd
16248ed16cacb7671b7589f65ed8587c *man/do.subgraph.Rd
619d666c42b882fb3108ad2574ef6247 *man/do.submatrix.Rd
b0a0d35f951af43c667e624c0ee38ae9 *man/do.unstratified.cv.data.Rd
4eab3550b41c877ee419e8f3be246c80 *man/example.datasets.Rd
faed24cb2ef4b63e4dbb34e6dee55d59 *man/find.best.f.Rd
0ab625fc22fbf7f4ccf4b47706005dec *man/find.leaves.Rd
37e17bc66c5dc9fdf44cfdda20e60b24 *man/full.annotation.matrix.Rd
3ce951ecb5b48692d9b0a6face3579a1 *man/graph.levels.Rd
d4ea7e493430fc3abca18aba76584196 *man/hierarchical.checkers.Rd
7246f45c3b5d7daca4edfee491d918cf *man/lexicographical.topological.sort.Rd
ede763fbe6e64bf7728942eccc560d0f *man/normalize.max.Rd
1643bf2f998ec9ba2a5f42bec322d742 *man/parents.Rd
2d7ed4492f0add4cdf51ce71f1118163 *man/read.graph.Rd
35f621252905984d124a6879097349f1 *man/read.undirected.graph.Rd
c46ee24a7b43a97ce8749812cc8f789a *man/root.node.Rd
ddb4d626122b6e430553b8e77cb24e79 *man/scores.normalization.Rd
66b51a0b4b6ebb0565d448cc8a9d2d56 *man/specific.annotation.list.Rd
1de8a79eb8e57b83f292c3713b57e711 *man/specific.annotation.matrix.Rd
4eeff386a8b295f79013dc926641be3f *man/stratified.cross.validation.Rd
5bc84b61bda372eecfaf24c44fe14fdf *man/transitive.closure.annotations.Rd
c47b9c02953fed40d8207df0771a946e *man/tupla.matrix.Rd
643df281d16cd945bcc396681d9d3a69 *man/weighted.adjacency.matrix.Rd
e7cfb84d4349461807e364db43dcea04 *man/write.graph.Rd
d5968e759166c7c97ffd510e47e1d79b *src/GPAV.cpp
e3d3cb360fbfdb3c6974e14eb5f09870 *src/Makevars
a02ba382db6b024cb986998db299dd7a *src/registerDynamicSymbol.c
