a975cc7654ec550c8c976aea15c76c17 *DESCRIPTION
195eb19d1e115bace6a817191c4cd1fa *NAMESPACE
dc408bbd88bba72bc48353d809ad950f *R/get_edge.R
65112a927b578a59d1202cf4d0923109 *R/plot.pplace.R
041ea98e9e194266e124cb32fcc4bf2f *R/pplace_to_matrix.R
c2d2059442ec102cc5d0bea962f54ae5 *R/pplace_to_table.R
b4bc4938a6ea9cdd4520fb9ecd3ad82b *R/pplace_to_taxonomy.R
3a97e22ae0aa5dc3a9adda6851a2ed94 *R/print.jplace.R
36555c9bee11075c7567d062ca03e5ee *R/print.pdb.R
c2c0a46120d2571aa760491c13f14eeb *R/print.pplace.R
ef3dc5a7066f18f81df55d2609ebf7fd *R/read_jplace.R
e660a73fe3f40257c2d774f7bcd0f481 *R/read_pdb.R
0e3d6794a636f3942ce3e90a4ec2bd5f *R/read_sqlite.R
bf59da7bba1cecbc1341adb40365fe65 *R/refpkg.R
5f267ab0a9acdef395345f467e9c24e9 *R/sub_pplace.R
a29be95516b04ba62b5caef60f990b91 *R/write_jplace.R
820370af921122c6ef644f1c52301fb7 *build/partial.rdb
b2e88231f8cedbc95bf40d82c501b1fd *build/vignette.rds
2940c854a6973292cec6d59ef862d9d6 *data/pplace.rda
d9dee13b1876261181cc9cb1287886c9 *inst/doc/bossa-analysis.R
9f0e069c2342287cf0c253162912d5ef *inst/doc/bossa-analysis.Rmd
1e0b9e6b0128acfc013d7b415d6ef9be *inst/doc/bossa-analysis.html
aa01a614ef48f231f268385ce6fb916c *inst/doc/bossa-refpkg.R
333beb61bedbffaf01a0b7a21b9b2939 *inst/doc/bossa-refpkg.Rmd
3276fc8a048f647d9bf8ac5fda6187db *inst/doc/bossa-refpkg.html
1ad3ba7f636ee9637863934852e73f0f *inst/extdata/1L2M.pdb
51434ae00a391e0dd09491e905a84b5a *inst/extdata/example.jplace
27ec70f7f4cd9769ad0beb627b933073 *inst/extdata/example.refpkg/CONTENTS.json
c4bf3ff828ae750f586405e9398cd204 *inst/extdata/example.refpkg/RAxML_result.bv_refs_aln
a37f8688ef7521de97a8b99f409da232 *inst/extdata/example.refpkg/bv_refdata.csv
e2eb55294651fcac5f05d1541bfd4e17 *inst/extdata/example.refpkg/tax_table.csv
edad2657c1dc294df41355f836bf8a72 *inst/extdata/example.sqlite
d0d5e3a13b6beb83e0be984fd65b348e *inst/extdata/polerovirus.refpkg/CONTENTS.json
0f509a99f1bd2ca5c245a4a3290f4847 *inst/extdata/polerovirus.refpkg/polerovirus_ROOTED.tre
aaece50c671f2d34cab7116b86d28af1 *inst/extdata/polerovirus.refpkg/polerovirus_info.csv
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus.refpkg/polerovirus_taxonomy.csv
1f4b508654d8291005d24e98a33c1db7 *inst/extdata/polerovirus_from_genbank_MAFFT.tre
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus_taxonomy.csv
318798aacd73e154c2fe4b9fbf16e602 *man/BoSSA-package.Rd
deddbbf03cca91571097b4c60f6d812f *man/plot.pplace.Rd
b6cdf0e2b985a1dbd954a693b608b9d7 *man/pplace.Rd
7175df907f52a5581b8289723a511ef6 *man/pplace_to_matrix.Rd
3a52b23083ac287d53e4d85774f9ca45 *man/pplace_to_table.Rd
295b929c66d79ffe3f86fb82718ccce8 *man/pplace_to_taxonomy.Rd
f9d46ef6b7958dbd49ee941018b55abb *man/print.pdb.Rd
ae82e62b42a132204eb782fe55f4e1a2 *man/print.pplace.Rd
59b73c4d87036284f947d2dfcdea923f *man/read_jplace.Rd
1d20356c70c94547f4ae64f7c45db297 *man/read_pdb.Rd
8918adb287dee1bac4feb26b77d15e26 *man/read_sqlite.Rd
e0691045b870a3ff239adda09c43cc3c *man/refpkg.Rd
45233040fe09f03490fe1b1db3f52ed9 *man/sub_pplace.Rd
143134b13d02ae387c055557b9d4dc45 *man/write_jplace.Rd
9f0e069c2342287cf0c253162912d5ef *vignettes/bossa-analysis.Rmd
333beb61bedbffaf01a0b7a21b9b2939 *vignettes/bossa-refpkg.Rmd
