# Generated by roxygen2: do not edit by hand

S3method(plot,geneCoverage)
S3method(print,CrypticScore)
S3method(print,coverageDataSet)
S3method(print,geneCoverage)
export(annotationsSet)
export(as.annotationsSet)
export(bam_to_reads)
export(coverage)
export(coverageDataSet)
export(enrichment_score)
export(gene_coverage)
export(genome_wide_scores)
export(initiation_sites)
export(ratio_score)
export(zscore_score)
import(data.table)
import(mclust)
importFrom(Rcpp,sourceCpp)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,rect)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(utils,capture.output)
importFrom(utils,count.fields)
importFrom(utils,head)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)
useDynLib(yCrypticRNAs)
