595b24ef1abc3349b8f1e0926644ee8a *DESCRIPTION
e969e50f540ce130087aa1cda51d5865 *NAMESPACE
96963856da6dc06d872cfe68763db6e0 *R/Make_AA_Table_Result.R
632a43680141fb7e52017404be3e0742 *R/aa_getATestResults.R
7b568b80ded3ab7eaf4f2c29bcc05661 *R/aa_graphATestsForSampleSize.R
537d033574997b305046b1ff527dc7df *R/aa_graphSampleSizeSummary.R
36b4a714d5b7f3790dd7a15c1421f97f *R/aa_sampleSizeSummary.R
e54ca22df9ba70968a7df4cfca6b3e69 *R/aa_summariseReplicateRuns.R
2a5c3912d002d7a76244d4407671b963 *R/atest.R
332b4bcd6c95ce4970fbc20c7d11b93b *R/efast_cvmethod.R
7f88b32a800fca35214eb1aea8e1569e *R/efast_generate_medians_for_all_parameter_subsets.R
74dba7707d62654a53404f3e5de75d03 *R/efast_generate_sample.R
00980a3e141b4f3c6f218fe3ab9072a3 *R/efast_generate_sample_netlogo.R
bfdec3840f1db8415e050f3b2a733359 *R/efast_get_overall_medians.R
599acaf61b7b95acfd8835fa816fef2b *R/efast_graph_Results.R
f841a16bd54054511f8b3a666ccf20fc *R/efast_netlogo_get_overall_medians.R
651ee6141c5da08cbc69ba71585d4fad *R/efast_netlogo_run_Analysis.R
83014ff5b975d2bb1326851f4acc2efe *R/efast_parameterdist.R
f2c9fd2dd8e710a193328eb1a3294c15 *R/efast_process_netlogo_result.R
0424a5501a10c27abe83b274dd236082 *R/efast_run_Analysis.R
6f2d8235b787e36375c6ee084baea54c *R/efast_sd.R
54bebb55c74a5b55066cf090400aa419 *R/efast_setfreq.R
162fb0eb080a10312ec8280f588b0c78 *R/efast_ttest.R
b49f094e4cb26b796dcf8891fba03dea *R/getMediansSubset.R
a20e138829f2d83266d19c2495462cfe *R/lhc_calculatePRCCForMultipleTimepoints.R
99f625e71467b3810c596ecf549797d0 *R/lhc_constructCoEffDataSet.R
56514a9094a4dc7b95fa870726f74f44 *R/lhc_countSignificantParametersOverTime.R
8a5f6b6fb830e947dee0323e99fa4c95 *R/lhc_generateLHCSummary.R
3ef865a53546a36e70c7312492dd6c21 *R/lhc_generatePRCoEffs.R
af3d03289b6cc43bddeae2970b845974 *R/lhc_generateTimepointFiles.R
29aff9631f07ffefcb74f266fd483cf4 *R/lhc_generate_lhc_sample.R
28981769433112e8d5ebde250ad36183 *R/lhc_generate_lhc_sample_netlogo.R
f9983bd69c18a492df1b37760de38a16 *R/lhc_generate_netlogo_PRCoEffs.R
3ed260970c3b4393136a6bf563ce5c41 *R/lhc_graphMeasuresForParameterChange.R
cadc707567fbd15220a51f13d0b97e97 *R/lhc_graphPRCCForMultipleTimepoints.R
0e2878c6e1ea6b5c546db61ee4c4d1ca *R/lhc_netlogo_graphMeasuresForParameterChange.R
90e4ea4af0541b28162716b211e2252f *R/lhc_plotCoEfficients.R
e64359a01ccb6d23bdcf746cf0684517 *R/lhc_process_netlogo_result.R
893c24efd01aa72ef4e352678684f9db *R/lhc_process_sample_run_subsets.R
6cd524d47417a993d17f6d70fc12d99a *R/normaliseATest.R
66b041981bb9e324d24a5fee056a296f *R/num_decimals.R
1f370611a5c02aa6f2e8de95e23f711b *R/oat_countResponsesOfDesiredValue.R
2f0ba0b5e76e8419e9be5e6477f4aaa1 *R/oat_csv_result_file_analysis.R
f178370ee07816d23477b958461ae717 *R/oat_generate_netlogo_behaviour_space_XML.R
fe9b3866b229a6f653473a7570a4fd46 *R/oat_graphATestsForSampleSize.R
652e163076966039d5c084025efdaa7c *R/oat_graph_Leish_ATestsMultipleTimepoints.R
2511a6c76b37677e725a275cfa6a3a8c *R/oat_parameter_sampling.R
f878871d7583a4eb4cc7a2c9987dce6e *R/oat_plotResultDistribution.R
9812c246e97d85dc22fec27ac8548b18 *R/oat_processParamSubsets.R
64168506cdd20c21b39cd278d819553e *R/oat_process_netlogo_result.R
49dd25d01c208cb3e0b7e5d39d25efcf *R/pcor.mat.R
60be69f7cd41ce49ac99bf4d97e642f3 *R/pcor.rec.R
f538a4f15e082deda9159cbfe9638fd3 *R/pcor.test.R
c772c5f6f75908045b2758fddb2a6dbb *R/perform_aTest_for_all_sim_measures.R
89cb1a1adc47e6c1fbdf29c5229279f8 *R/plotATestsFromTimepointFiles.R
844e2df3e28effff6d5f4639c89ce6a7 *R/plotPRCCSFromTimepointFiles.R
ade69f75ce79c8d878cdced380584385 *R/ploteFASTSiFromTimepointFiles.R
0cb4c25dcc03ff2784cfa0b63b1b6195 *R/prepare_parameter_value_list.R
b3691acf95883511e472e782b6bf9879 *R/subset_results_by_param_value_set.R
44df24256d2dcb3798fdcc21f506d615 *R/table_header_check.R
cb8d8f1d8b7ba740eb47f7f0d2b7e19e *data/AA_Example_ATestMaxAndMedians.csv.gz
aa16c40d7758580c2708a0f3ae20fea6 *data/Curve1_Dummy.csv.gz
af3bfd61c4765ad4eecebd480129ff9e *data/Curve1_Results_Summary.csv.gz
c67b842eaf0f0738b55f76bf6d8d8b72 *data/Curve1_chemoLowerLinearAdjust.csv.gz
343a5b3d8de8e29367e1b3bdd2db0b62 *data/Curve1_chemoThreshold.csv.gz
eb575c88bebb750e5f81adaf927083a9 *data/Curve1_chemoUpperLinearAdjust.csv.gz
4e9050bbf66fe9a655913448ec478531 *data/Curve1_maxVCAMeffectProbabilityCutoff.csv.gz
ef91a48725a6cbd3b9fa7c4c6608aa24 *data/Curve1_thresholdBindProbability.csv.gz
3536b90196b21171679a71546156f512 *data/Curve1_vcamSlope.csv.gz
ccdc18c2ba135aa39844c764b3b40b88 *data/EgSet_LHC_corCoeffs.csv.gz
600ad3b5da1f3f17eaf6cdf0ef0e46ac *data/LHC_Parameters_for_Runs.csv.gz
d9c67b871ed0e9e8699b46c89b5fed6b *data/LHC_Summary.csv.gz
c6c0f7f1ba411545bb7693c31f082a8d *data/OAT_Example_ATests_chemoLowerLinearAdjust.csv.gz
1e70734ad8bc610012ac7c1f2002d66b *data/OAT_Medians.csv.gz
3fdfcb5af6678f4a7fb15ac3c4335f52 *data/OAT_Sampling_chemoThreshold_Values.csv.gz
018fa375cb991a6598ca0d1a8fd53944 *data/OAT_Sampling_maxVCAMeffectProbabilityCutoff_Values.csv.gz
b2f4b3c6e2bc0138c0eacb2132252354 *data/eFAST_Analysis.csv.gz
fa3c2293a3d59590249f435e7abd1bac *inst/extdata/AA_5Samples.pdf
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366d1e29cff08defbb62c5c9f0cda7f7 *inst/extdata/AA_Results.pdf
e7e0c8c8db64787ec6f2456a206a93ce *inst/extdata/AA_Tutorial.pdf
d0a7e01ea4fb69eb40d7b31c9ed00e93 *inst/extdata/Example_Simulation_Replicates_and_Medians.zip
ea3ad6101003e8bd2db3c9e1589a26ba *inst/extdata/Install_spartan.pdf
56af45c6f3080dcbdd11096182b680c2 *inst/extdata/LHC_Folder_Struc.png
a2d6ee3184e2b14afd1e37ce422add63 *inst/extdata/LHC_Tutorial.pdf
d70ea810393bf00fa04720ff94a5f1eb *inst/extdata/LHC_chemoThreshold_Velocity.pdf
0f4003fea87f603fbd1ebb5faaf57306 *inst/extdata/LHC_maxVCAMeffectProbabilityCutoff_Velocity.pdf
15444ea05a6c8e2e62dbc42a8177c67b *inst/extdata/Netlogo.pdf
1eb3bdd4cc01286e9384f8fc09e64f6c *inst/extdata/OAT_Folder_Struc.png
e8295dfbd824afb072c496d95ee58bd1 *inst/extdata/OAT_Tutorial.pdf
7f5e24a73400ee7afcfe69966e54f348 *inst/extdata/OAT_chemoLowerLinearAdjust.pdf
1877fb3801b0bdfb04e5441b8a07f939 *inst/extdata/OAT_chemoUpperLinearAdjust.pdf
d038aefed55658f4f613c6016d881fc8 *inst/extdata/chemoLowerLinearAdjust_DisplacementBP.pdf
b31079f1fe536712a2444bba30fad913 *inst/extdata/eFAST_Displacement.pdf
cc637631e67596478e8907ecc38987d4 *inst/extdata/eFAST_Folder_Struc.png
141ca9e96f44fc29473f8c5eabb564ee *inst/extdata/eFAST_Tutorial.pdf
9a961c7d2e2588e9666798f4408aa80f *inst/extdata/eFAST_Velocity.pdf
2e0a2ed496df38e3a28c451b2ce5bf37 *man/Technique1-aleatory_analysis.Rd
196fd8f1e1e1cceafd097d0ab1e2f0a5 *man/Technique2-oat_create_parameter_sample.Rd
4e5ecea44feadbd591092bb52e09bac6 *man/Technique2-oat_generate_analysis.Rd
dc180bbe6878d2f37347190ed34da2a8 *man/Technique3-lhc_create_parameter_sample.Rd
e0b252bfd0d4ab3e13b3edd56a65f9ad *man/Technique3-lhc_perform_analysis.Rd
0250733be8fde1694bcb7a9a020523bc *man/Technique4-efast_create_parameter_sample.Rd
b855dbe13a8e57172f08d07f82713716 *man/Technique4-efast_generate_analysis_results.Rd
500abba1251dc95a3ac54d6eeb064e31 *man/Technique5-spartan_and_netlogo.Rd
4466090698e65a346d57e20fa72bf616 *man/Utility-getMediansSubset.Rd
d050f630eb500a473f35f7498e25c4f6 *man/Utility-sampleData.Rd
bb6ddeab203b4c3d5abeb14f47e88e54 *man/spartan-internal.Rd
