b9f079109535e54790a55db43e536d96 *DESCRIPTION
180209480cb36b70c2aa63534b3c4ab3 *LICENSE
177e47605952d5a1d67cee746bcb9861 *NAMESPACE
b47f2899be3d78b94755bb7d6c7b1686 *NEWS.md
66c38b62c1bb6e3fa92ad1fcb9f4c03a *R/RcppExports.R
29d624bde6fa7348efa7ee16416da159 *R/baserate.R
a3544794e1f4d798888c12b2e11b5961 *R/baserateCT.R
dfc356f4439b6d60d484e27a3f59c3b5 *R/baserateSet.R
87cdbc8d0bf4da396d80264b2a6c6c47 *R/calcKappa.R
6c94e27233f02902be15df354838605b *R/calcRho.R
48b315c8e45000e3e89eefa9b8ca7dc7 *R/calculations.R
aa7a88d3b20b8371749a899b61a51383 *R/checkBRPKcombo.R
d4f29dbde2f0d9aa2ddb1233cdf649e5 *R/codeSet.R
c5f2912653318418e84320836fc676c1 *R/contingencyTable.R
2cc427364a89e08a4a46dbe8ca5aec8c *R/contingencyToSet.R
09ebe821db9f67469a6a853afeff114c *R/createRandomSet.R
52709505fccd231739230edc918a34ea *R/createSimulatedCodeSet.R
0ea4a26bceaf5948aeaac3bfe4360f15 *R/genPKcombo.R
f5095749a44b1773ddd25bc1eba73ccb *R/genPcombo.R
fa8b411b94360203e0a285e5e25d84d9 *R/generateKPs.R
2836f1d2d4c7fcc224d8f23c99fd686e *R/getBootPvalue.R
f7862e53267f520e740ccef558b761d4 *R/getHandSet.R
0e9a3d8b9b1cdfa4e1086db68dee69e3 *R/getHandSetIndices.R
db4da29e99337aff18d7ef0e9aa76783 *R/getR.R
bae601539288fe086292d1c34ce3f6a8 *R/getTestSet.R
7203725778cc408204feab63f28a080e *R/kappa.R
e90c6702125f4fe6104383d571cffbca *R/kappaCT.R
aca92c5845fc0ade59ff9c11a254a081 *R/kappaSet.R
9ce16677be845061bd8538f5ef6684ed *R/prset.R
37e7200c6504f031c64a441cda7e5284 *R/rho.R
481e7f238f4afdff5f0aee8b512a99e1 *R/rho.file.R
fdb8ae19a03834a79e43b0164a1557d0 *R/rhoCT.R
93b4f1ab4d132f9dafa9a4a0f4918282 *R/rhoK.R
121d8665470ad3edf881a310d5cfbe99 *R/rhoMin.R
b6237e280ec1ed930448f5556fe41506 *R/rhoR.R
a06522a54b04b1be000a9ee2bdbbf136 *R/rhoSet.R
9978b829267c41f9073b078804cb0faf *R/utils.R
59286740e3ad6f870733f8de66e929d6 *R/zzz.R
f0724c41fa8c4978eedcc414142af74e *data/codeSet.csv.gz
a7050f9af40c2b7daa15addebe25bdda *data/codeSet.rda
ca5487dd3a78a6aa1d71d8f50808547d *data/contingencyTable.csv.gz
5e3ee40fdcb32ef83d53bcba2153a37f *data/contingencyTable.rda
cca9ad33228e15890433b34d78f93330 *demo/00Index
7345ccc01c0c97ea71280bdadc990dd6 *demo/backup/c-benchmarks.R
31537c05122a013b86bdc723326f741f *demo/backup/calcRho2.R
0820d6bcb7009287409412829626a743 *demo/backup/compare.R
4b3ee67168d7c557c7e7524654e04399 *demo/backup/coverage-report.R
e5e647a224e89db82159e50ed7ffe6ea *demo/backup/distTest.cpp
2138a175891f36135078ad42dde91db5 *demo/backup/mc-try-1.R
9cad2f697e4570ed588295697bc091bd *demo/backup/performance-benchmarks.Rmd
935ea3ace662e0dddfa85955a128363e *demo/backup/rhoCT.rmd
2e4013a76a1e93b0d3f507359f87bd9e *demo/backup/rhoR-benchmarks.html
f393036026c73843ec888f9137ae01e1 *demo/backup/rhoR-benchmarks.rmd
7070c7928afe28b6cf75584239ab1273 *demo/backup/run-mc.R
fcda5f10eadaa4c552bd5dbdc4d19df8 *demo/backup/sample.indices.R
c170270332c1474d4c0a4617094f322f *demo/backup/testRhoFile.R
1e8a70185ef26329f602acc65051efb9 *demo/backup/testing-fp.R
73ed717303e19e6460a7950b002d5da2 *demo/backup/testingSimCodeSet.R
72cedde090c0477e87d580c94de2643f *demo/calc-rho.R
93a4ccd6c60a950f03a774dbbf23941b *inst/_pkgdown.yml
3b65d49b579c6511661acefd22e7246f *inst/docker/rhor-devel
92eb225f1265831d5d86a2afa2b4811d *inst/docker/rhor-oldrelease
8959b25f8ed9c88314af3187521385e3 *inst/docker/rhor-release
b756f3519802f13ebb070ecf00837f00 *inst/docker/rhor-release-test
11a3d821c1f85ae588ad27ff0ee52165 *inst/extdata/codeSet-multiple.csv
2f001bc00f7ba85ccc45af0e01de147c *man/as.code.set.Rd
1d069e62cf4247ada5837a80e1c01b0f *man/as.contingency.table.Rd
d48d38235467a8783afac24eae2d824e *man/baserate.Rd
16703ec1cd1759f91c675c0a1ad0b487 *man/baserateCT.Rd
2c60357561f6aaf16b38899f0a7d059b *man/baserateSet.Rd
aec9a7bfcb9ed748acbbdd3d17677cbc *man/cash-.rating.set.Rd
271f779bc1287d1804f8813e61ac3366 *man/codeSet.Rd
f6415383a096b08ba5f33bb34aa94af9 *man/contingencyTable.Rd
4169589d60a2d0a9488b304a38c63bef *man/contingency_table.Rd
5700e7f83bc94692968ce5213dac9a78 *man/createSimulatedCodeSet.Rd
fbfb5f217ebbc0575d4c91c293f8bfd7 *man/figures/logo.png
0f98d493fd1146622b96ec7655330107 *man/generateKPs_c.Rd
00d9f3420d06b9ed05d9ca336581677b *man/getBootPvalue_c.Rd
7386b2749f42ea1f57411108153b768f *man/getHandCT.Rd
49f258a01dc9f6e0c1cbe0cd0f57af17 *man/getHandSet.Rd
9817ad35ae1a19a29d7427fe82ce1efe *man/getHandSetIndices.Rd
a5bdf1943b7f834612640324412690a6 *man/getHand_kappa.Rd
83b81159008a6718206a25048a8da29b *man/getTestSet.Rd
cd16dbfe7f95a70817efc1f1ba5cb09f *man/kappa.Rd
41523008df85f9732dedd7e984f27c96 *man/kappaCT.Rd
0b9f1258065e6c85d8f56790603b036c *man/kappaSet.Rd
ebd878516a18519ce0eaf4f678eddd4f *man/kappa_ct.Rd
d27e2740b6a7f34a2c57d4237726753c *man/random_contingency_table.Rd
ac1328eae2a8e357a9ceb5bf365cdb87 *man/recall.Rd
b81b9e440f6387d7da34089af14f0274 *man/rho.Rd
ab459e8238cc2f80df085f4f27afb391 *man/rho.file.Rd
b772c3245e5eda75a0d2baa11aa2a530 *man/rhoCT.Rd
3c04f0e47f52a7a5700e66753857590f *man/rhoK.Rd
6cc6e206dd3ce99993cca0cb4af783ab *man/rhoMin.Rd
b2902674c29072372a6dc34a795521ba *man/rhoR.Rd
abf583fa39b1c4fcafe23f4b8a8738ec *man/rhoSet.Rd
de00c705b9aae8cb7eb1626a1d579086 *man/sample_contingency_table.Rd
4e86f33569be9e71968a0e8d005a8eb1 *src/RcppExports.cpp
4c3ad9c908af18e47fe3adcfacd97c12 *src/rhor.cpp
93bfe60d8eaa43de7ab99a17ed3a91ac *tests/testthat.R
cf08c258ad3f4bd3e095a399718daa24 *tests/testthat/test-genPKcombo.R
93756aac0b006e98c8e70a310fac3f90 *tests/testthat/test-rho-returns-pr.R
4332d73f28a7561cadb3d4ac74a22c7e *tests/testthat/test-rho.R
46763122fb888032e44585ff03bf5519 *tests/testthat/test-rhoFile.R
5ff68dcc0cf1ec00e8f1007e87020a58 *tests/testthat/test-test-createSimulatedCodeSet.R
af920a12056bb340156e74fcd5d2d66b *tests/testthat/test-test-getHandSetIndices.R
7664eb4ba9dc804f5a54b99c06bbff20 *tests/testthat/test-util-methods.R
721044363a28b2269f8eff08351c38df *tests/testthat/test.calckKappa.R
2f74710232b2ec26163342172309d181 *tests/testthat/test.getHandSet.R
6361f6f71113347eb9663bce01a5466c *tests/testthat/test.getTestSet.R
ea874fbde7bb5a9f375e772c381ae615 *tests/testthat/test.useDataFrames.R
