939a7721904c1fcad5980432e8c001ca *DESCRIPTION
6fa70b2885a28dc47dd27730a84069a9 *NAMESPACE
4cbe95e304cb40c8f1198da9a7ada131 *R/rbamtools.r
fc9a0f34fb3246a8a6327aab59f11185 *inst/extdata/accepted_hits.bam
ae605096a18a55922d8c9fd750b919fa *inst/extdata/accepted_hits.bam.bai
6ab922048f9db7b14b34dd43ea4eddb6 *man/as.data.frame-methods.Rd
5d21391051a154c7387fe5d62b629bf0 *man/bamAlign-class.Rd
834772109d6ed6bb079c0adc90241a25 *man/bamClose-methods.Rd
be6c7ac094b280569d130e71ae78182d *man/bamHeader-class.Rd
38d5360cb908c6907b17d1d5844a477a *man/bamHeaderText-class.Rd
ad811ec41b638c7e3f348e94ddba1ad7 *man/bamRange-class.Rd
d564263781dfeb7034490085f58f6411 *man/bamRange.Rd
37865f3eef194eeb4c5ac348469d8c25 *man/bamReader-class.Rd
ee1ddf1c7b2632f00b0f5ed84e671962 *man/bamReader.Rd
78704d3fd41df76305379b9904bc88af *man/bamWriter-class.Rd
a7733d4fdc67173bba1f1a21fefc9f8a *man/bamWriter.Rd
0eb189693b2a7fd0fbd842f59f5b854c *man/filename-methods.Rd
a4869f6d355796f67c7b64f88363a9bb *man/gapList-class.Rd
4b8cd4f0931f00f2e2ec61f32e6e83b9 *man/getHeaderText-methods.Rd
afa3623d21941da3c262a06b75c7184b *man/getNextAlign-methods.Rd
61ece04498943dd1a861bf0b6dc575e0 *man/getVal.Rd
5b5b8195e975c062ab0239ba1d904cf3 *man/headerLine-class.Rd
e746e233be84d9ca887d3f5dcd81bead *man/headerProgram-class.Rd
03ddd971a07e683859abed1d56ae809f *man/headerReadGroup-class.Rd
60349fea4b5294a323535572ee0625f0 *man/isOpen-methods.Rd
c5648103e8a7aae8defd70e26f69ede3 *man/rbamtools-package.Rd
9e4d4d24d11f6697f89ea5f7ebcea838 *man/refSeqDict-class.Rd
cabae7454258c905b46a2cbaf990cc26 *man/setVal.Rd
1909330c349a0b8654595c7accb89fb1 *src/Makevars
b2ab8d847907bfe5f92a3c04cdf4d2a0 *src/Makevars.win
ccc9e5e8f8286bb9b0f7c8b8b66f12e8 *src/align_list.h
4d30709cff16e0554c085df1b7d0eb3b *src/gap_list.h
187443cd3b015828263b861dd5ffdd70 *src/rbamtools.c
e7937a1f41d75873e0e60d1084a77b11 *src/rbamtools.h
2e4c02f66ddf5b45e5f82ff579740386 *src/samtools/LICENSE
2ed5e20907d44f4c2584ef197296abc6 *src/samtools/bam.c
b3c42f239a0f1474358e2b12c83c154c *src/samtools/bam.h
cf98ab784ab45ae45d1a56733ce9b0af *src/samtools/bam_aux.c
aba13a3883d7d117af33a6d8fe8c1ed1 *src/samtools/bam_endian.h
8b35bfd92210b3c4a3e7015146d8a192 *src/samtools/bam_import.c
8d2f2c341bea6ba7b7e084f7e146125c *src/samtools/bam_index.c
3d182e57715cca7ebdd4748d3ac08cae *src/samtools/bam_sort.c
bd257862695fb9adc5e31f2e144289be *src/samtools/bgzf.c
e376e8bf01fea48bb5f169aa5df70558 *src/samtools/bgzf.h
cca296bfde636df363483321368c26f6 *src/samtools/faidx.c
060c5e036ec8bd44ec5e25549a1e160f *src/samtools/faidx.h
827428496eca8cc4aa8edd431e884f29 *src/samtools/khash.h
eba34f72610803cfb5fc09f4a8bf31b5 *src/samtools/kseq.h
673540581d98ec8fb359bf3ca08abfe3 *src/samtools/ksort.h
7fd7e5f5701b912345a4005add5076c1 *src/samtools/kstring.c
f42ecea12ac8c5e0efc76061a2fdf29d *src/samtools/kstring.h
1db8d745431381326bd4a4ce83b26e1c *src/samtools/razf.c
799bfb3cc0b3c7a25f84699588aa1d96 *src/samtools/razf.h
f9718d487a6cbcda29ca3286b6987b32 *src/samtools/sam.c
eb06482d20c8cbceead50f119c2a0229 *src/samtools/sam.h
752b4fd51d86c25f2cd01122f6f6371e *src/samtools/sam_header.c
8dd7c977d83077c0554fad6a1bb78043 *src/samtools/sam_header.h
