89243301fbdb833ec1846e0e2adaf282 *DESCRIPTION
b4da13d39b6997a8037860229ec99aad *NAMESPACE
ee0785c1359dc532174a89d162bf58e0 *NEWS.md
c15f83677491970ace419c9fcd50d195 *R/convenience_wrappers.R
a93541bf1060ed28ed6c506134487188 *R/data.R
2b22cf56171c2cb4bc1d98bb67208bf6 *R/deprecated.R
e20f1874bfc27da9d9495ae7b45f2dbb *R/fbar.R
c3a07fb1fd98fa0072b1930eff4422bc *R/gene_associate.R
e2f42338de534be5daf94a1c8f71fc4d *R/gene_expression_evaluation.R
d67d336e60f450d47fe6f59f8c25892a *R/metabolite_utilities.R
abb6622c55f7ee4a17d3e0fa4d4fa83d *R/parsing_and_conversion.R
8191e1518b150c022cd763c0e735c1a2 *README.md
15261e99fa1347aa405a3a8c28cd2bba *build/vignette.rds
a051a7fbc9039e7e15fc38900655cb93 *data/ecoli_core.rda
979dd6d63827591086198b894bd8efaf *data/iJO1366.rda
2392b83af68b4a3082f989cd4c00350d *inst/doc/Introduction.R
360e51ccf7fa41c5b7cf2dba11f881ab *inst/doc/Introduction.Rmd
6132c7abe956cb4191651b8b2b63a414 *inst/doc/Introduction.html
ea1c93d55f2e9dc66d8768a3c446fb6a *inst/doc/Multi-Objective_Optimization_case_study.R
8a513847a760def052244b50966e6532 *inst/doc/Multi-Objective_Optimization_case_study.Rmd
8521854d73bdb90816841378dfd23654 *inst/doc/Multi-Objective_Optimization_case_study.html
9670cfb7dcda04eaa328e16ce0ac5540 *inst/doc/Tutorial.R
42ebcf701ebc838899a21fb9ccef32fe *inst/doc/Tutorial.Rmd
cba384827e0f6323dfd1fd9fcf71a7d7 *inst/doc/Tutorial.html
a943092895f99968d46e1c1bbd353ec3 *inst/extdata/ecoli_core.tsv
8b172c8c23987911b75df955f09864c7 *inst/extdata/iAF1260.tsv
72adea6d99c6b505752469cd78080cbd *inst/extdata/iJO1366.tsv
e70e0d85c2bfc1061d8737849efc201f *man/decompose_metabolites.Rd
0b27bd8f4eaecf3bb02047081e73d4b4 *man/ecoli_core.Rd
bb85a7ea157b2070d1cf232697d819dd *man/expanded_to_ROI.Rd
a3e38b7f1dc99236f611b0bed8f41fbe *man/expanded_to_glpk.Rd
e33f4b81bff310caadbd4489480d71d4 *man/expanded_to_gurobi.Rd
76e834c9c38bfd6b6c832f52c63c835a *man/expanded_to_reactiontbl.Rd
bce2a805afa74ffd4c703863a815bab9 *man/fbar.Rd
867c28a7e8b0534d841c909d37b0e23b *man/find_flux_variability_df.Rd
d15ba7a387c92c8e3443fe7be796ad0e *man/find_fluxes_df.Rd
85bb99c4cc9de1eb14ebf23f28205527 *man/gene_associate.Rd
cb3b7a7854377c17924472fc2df05161 *man/gene_eval.Rd
0d4a635adf61baee91c16458f57f23cf *man/iJO1366.Rd
38a530eb583f031d2fe724f9f0a46214 *man/parse_met_list.Rd
552cd5cd0bf625b104d355aeeccb3a42 *man/reactiontbl_to_expanded.Rd
d8d44bc972a8d384e7f52577802e3e58 *man/reactiontbl_to_gurobi.Rd
de47ab1870b8a5ae1267525fb10109c6 *man/recompose_metabolites.Rd
3f8b5db0453ac72f6b769d0bb85a9af3 *man/split_on_arrow.Rd
188248e4e9305950e49fb1adb02d87ac *tests/testthat.R
75a1af070d00708225af813aa0d9afe4 *tests/testthat/gurobi.log
487cb8f553bb725441527edd0240d19f *tests/testthat/test-ROI.R
88e540790c4eed2b36c461a70a837792 *tests/testthat/test-ROI_plugins.R
6015b51063e2c88d568a2f3e9e2f91c3 *tests/testthat/test-convenience.R
7e22b3560818da90d1d5dc4d369b4177 *tests/testthat/test-full-size.R
e01f86592f8982495540ce21fe3a38a8 *tests/testthat/test-gene_expression_processing.R
77914f331cab641e47ec34c8e4c99c6e *tests/testthat/test-metabolite-parsing.R
a062b0484eb7932b85d0e3d4493f6cdb *tests/testthat/test-parsing_and_conversion.R
360e51ccf7fa41c5b7cf2dba11f881ab *vignettes/Introduction.Rmd
8a513847a760def052244b50966e6532 *vignettes/Multi-Objective_Optimization_case_study.Rmd
42ebcf701ebc838899a21fb9ccef32fe *vignettes/Tutorial.Rmd
