eba75bd44bddbcc1e2827e49ff45b1b7 *DESCRIPTION
cf9584bde83dcc08683081ad8072fe19 *LICENSE
8d30e1a58ed1231bb36e14874715db90 *NAMESPACE
be8def25ecaca88f7471201f7a30596d *NEWS.md
4bc5005abdb7fa4d7f407b7e08636681 *R/RcppExports.R
5eb24f0d082dfe01f027ff9e258d161b *R/cache.R
4c7069a747099ce97ee14900eb19b880 *R/coala.R
765d66df2b2017cf1075d000c4492949 *R/feature.R
af9549aa2bf11c0d97192bd50f3d0105 *R/feature_growth.R
5f72d5106312f10e8ede498ace1f62e3 *R/feature_migration.R
ee67ea190df0028f5138f743cf8e7cb5 *R/feature_mutation.R
806ff948367002bc065e0b6fe2ecb656 *R/feature_outgroup.R
297a4f9537a0875d5c79bf2d84c4606b *R/feature_pop_merge.R
70af11a6a6d951753b98da3b5c1538ae *R/feature_recombination.R
ac7324266d966422787be6c467c55560 *R/feature_sample.R
bcb3b4dd6cef97a32f740a4056503aef *R/feature_selection.R
0ee3a54c355377313a106dec5bc05835 *R/feature_size_change.R
e1e2fc3c5b871ba8677a28b9187cf775 *R/feature_sumstats.R
b585fa798102ef998b2664fe8355ad3a *R/feature_unphased.R
6e7d193b1f728fc0bdc65320ace55938 *R/locus.R
e2cabb7dd45243ba7fb61b50960c53c8 *R/model.R
01f5bf2967ab0819408a32fc5a51a99d *R/model_build.R
07ba2c6d42c4f061b46a1fba733eea90 *R/model_check.R
61a7db908ce07dddfc663c5660957de3 *R/model_examples.R
64c13ffa7096726fb289e5c947134cae *R/model_getters.R
133039a485484f44b488bea633848ee4 *R/model_print.R
7b3aafc9dd6c29f10a64bf9dc9cc0b48 *R/model_scale.R
79a03e8e3266dc13bb42a7a1758075f1 *R/model_simulate.R
ef43e1656b7b967f4eb7b61c94354bef *R/onLoad.R
cd93388beeca85d6fb6c503c87852d6b *R/par_zero_inflation.R
a4b3dac5d4566c4c56d87cc653f58dff *R/parameter.R
b928c5f8b260a02e47610d563d74b62e *R/parameter_prior.R
9e815dc37af5d71fc5485959052a6bf6 *R/parameter_variation.R
44a346e01f2144ccdcddce2d86b2bdc1 *R/sample_seed.R
cf95d7bc00a8a8dc23eac51d0e5168bc *R/search_executable.R
a01ebd8953b2c8f3008a27983d7affc5 *R/segsites.R
18da92e103fd2138c56a1ecd52d2d8b7 *R/simulator_class.R
b46d9832ee3020900f08c25f1dc00552 *R/simulator_ms.R
9458bda4a29f3f0433f56f4426c00226 *R/simulator_msms.R
1f55ffe04b6d9ddcdf8a2698388c3cab *R/simulator_scrm.R
17bd1a1d6fe7dc06b908faeafc619a4f *R/simulator_seqgen.R
27e783a711633fe11e207b833750405a *R/sumstat.R
c761e249aa4811896a1b5b92945809e0 *R/sumstat_dna.R
fecf6a03e3d343fef9372046bf0f2a9f *R/sumstat_file.R
9a24bf8529e3709ca224d982017c53b2 *R/sumstat_four_gamete.R
43901866215323db9e8c25ad8889641c *R/sumstat_ihh.R
a2942c1410d9d347536346008512c1dd *R/sumstat_jsfs.R
393f51ee374e00d543455e345e2888d5 *R/sumstat_mcmf.R
0760e5b5a58d4c31e4a06d9906ae4736 *R/sumstat_nucleotide_div.R
b5dcfa867f3ed7a957e1aa96b15d8ab5 *R/sumstat_omega.R
1ace7e754e95aba26fd9c96267f1b378 *R/sumstat_seg_sites.R
bbe6a0afffddfeaf80039d8ef354f0cd *R/sumstat_sfs.R
a18af61d273a07634b441a195f3e729f *R/sumstat_tajimas_d.R
5b2e255730cc516cbe5e2512d4fc02ac *R/sumstat_trees.R
e94973397e72438eb7fa09acd3278b89 *R/tempfile.R
b99d7c0f27574f03db4429b522969555 *build/vignette.rds
e03d8b73aaf9a32595bb8fd1f0d8454a *inst/doc/coala-abc.R
cc1357032a72171d980ccabfda8d0afd *inst/doc/coala-abc.Rmd
becf66d584d9c8ea4555e540543307c0 *inst/doc/coala-abc.html
7d925d99f143140fdbbcef036d5f3e32 *inst/doc/coala-extend.R
bd8c45375ed608fa4ca45cfe3ef532ac *inst/doc/coala-extend.Rmd
03ae6edc0b1c764bf83a4817a1ecd61f *inst/doc/coala-extend.html
450cc2176fcf0cee20991278cb79c5ff *inst/doc/coala-install.Rmd
3ef3324e09127b8be0d22ab49bd88a1e *inst/doc/coala-install.html
d25df3f9a9f01989662fd0818e254fa9 *inst/doc/coala-intro.R
def0d0687d48f350e293e79a1a9ce666 *inst/doc/coala-intro.Rmd
bcb53268b87d722fe4b3d4f5753d1825 *inst/doc/coala-intro.html
acc22496437d77cec0651f92086e7576 *inst/include/coala.h
78c00314d3246529b4f78c80bd96c5ed *man/activate_ms.Rd
bf14ddc464b7c711ba672346caf4a8b5 *man/activate_msms.Rd
7b7c91c6bff107aef887a2653e110c5e *man/activate_seqgen.Rd
e010c2b99d76c69c6109116b3a30c1c8 *man/calc_jsfs.Rd
70a5857305ec59fac5cdbb62174f1f25 *man/check_model.Rd
501ed5aa26f65e23728e7d00695741b1 *man/coal_model.Rd
352bcb0062ab53153cd21ed1b3435330 *man/coala.Rd
22998000ac9d17b77c44259b51ae1495 *man/conv_to_ms_arg.Rd
48ac3ec09d53104593cf25794b0ffcbc *man/feat_growth.Rd
f44f8c93773571a50d8f4810dedab4dc *man/feat_migration.Rd
d9491f1a10644e73ba9ce34feb739e8a *man/feat_mutation.Rd
46e2444a69d887de8374a23cbbf724c4 *man/feat_outgroup.Rd
ed25fc9680868619336922d688175367 *man/feat_pop_merge.Rd
cf8416a09b3673698c05b83eff6ce7f5 *man/feat_recombination.Rd
236a6ceeb8e24c5b12688fbf77b1cff5 *man/feat_sample.Rd
ef40946e801ee0e494137de201dd6d7f *man/feat_selection.Rd
d78c3462fa0853d4a6abccb5ef5d22ac *man/feat_size_change.Rd
f746bb3d5dcf07dce8555dfc505218fd *man/feat_unphased.Rd
dc9cbb446204c1815e489a06cfd385eb *man/get_features.Rd
217972699d4d30ce624e3b5a5a4aa498 *man/list_simulators.Rd
cc90d3101d61d1fd03004ae8f7e20c1b *man/locus_single.Rd
b83eafa2a8b950b6d72f7cb590dd1b53 *man/locus_trio.Rd
d575ba1477394d2221472b81f3d9406a *man/par_expr.Rd
bf2ff0d5183fbd740038d431fb383fdd *man/par_variation.Rd
024a040a71dc0e9d961c231c9697702b *man/par_zero_inflation.Rd
0e8199604acb2b0b1d16fa45564702de *man/plus-.coalmodel.Rd
9a34b54a5fe86851ed7475325df4dfb8 *man/scale_model.Rd
3fc27381e7bafc78dd5000cea7b17152 *man/search_executable.Rd
abd09585537530756374f112fe047f7e *man/simulate.coalmodel.Rd
eff09566c5e5d8de8030f6e208e232e5 *man/sumstat_class.Rd
0698b5b8fc690458ddc608d96ce5f329 *man/sumstat_dna.Rd
5241020d75c5215338ab452aadc53e3b *man/sumstat_file.Rd
9b3689448ee025bf97d2163ce5a1a761 *man/sumstat_four_gamete.Rd
464cf05b756481cf624b1b34e514bd12 *man/sumstat_ihh.Rd
ac154c928596bced42eccb74990654ef *man/sumstat_jsfs.Rd
6b3b59207d84d284e56144217c1f0212 *man/sumstat_mcmf.Rd
d8932b3cb14de477226329154eec5662 *man/sumstat_nucleotide_div.Rd
bcc84aa377e4b8e09bb954574f027840 *man/sumstat_omega.Rd
9c39945e97b396207310a6b33422346a *man/sumstat_seg_sites.Rd
ab2aff2351b651fe2fec214447ac2c79 *man/sumstat_sfs.Rd
70a064d5b2e13aad2d608e4b0b3ea61b *man/sumstat_tajimas_d.Rd
418b477ec11f08423fdb39719b048809 *man/sumstat_trees.Rd
f21ecf8b194915353aa371c0315e349f *src/RcppExports.cpp
4499b663468128be10087d657496d8dc *src/parse_ms_output.cpp
277c8e4e81342a93eeae7d3c27a54806 *src/parse_seqgen_output.cpp
170f94c70c0d79df30d6de7b54392c16 *src/parse_trees.cpp
6a99d96804858e806ce3d5110151ab00 *src/seg_sites.cpp
7c7754a063f0a31a999f4f81f8aae354 *src/stat_fpc.cpp
763650afe24108fc0c8940bb6d0887fe *src/stat_jsfs.cpp
0a85e108ba84dfad554bc3c7012f4b6a *src/stat_mcmf.cpp
31a6b62dd92dd7636579df92c14b580a *src/stat_nucleotide_div.cpp
aaf11090d9d749622348f85f6448be08 *src/unphase_segsites.cpp
abf089025363940df349dbdfde44b03f *tests/testthat.R
fcc9745b2a849534a07e539b02698990 *tests/testthat/test-feature-class.R
1370965f60522697d7fba233b456b1f4 *tests/testthat/test-feature-growth.R
b4425ab7444fb6896043d60511970474 *tests/testthat/test-feature-migration.R
fda4248c7769d177d0f6614c41ecd906 *tests/testthat/test-feature-mutation.R
96096f994aa95e4b648e0c18862f1ded *tests/testthat/test-feature-outgroup.R
85f025f8b2ad06e163b58a4431518d1c *tests/testthat/test-feature-pop-merge.R
c2b0ea23277e66b531575cd5716661b2 *tests/testthat/test-feature-recombination.R
9cf37e0854fffb00cf6f613c11745618 *tests/testthat/test-feature-samples.R
4e767d7dd5bd48445529868595fc0bf8 *tests/testthat/test-feature-selection.R
a50d28e7585c9c266acff06fa2469159 *tests/testthat/test-feature-size-change.R
7d62e24112d73a8ed052f71eafe0229b *tests/testthat/test-feature-unphased.R
30dbed041b1eaccd991d4e822e082295 *tests/testthat/test-locus.R
eb0950fefdc826fd793584ccbb9c7f2b *tests/testthat/test-model-cache.R
03da048540b4d2d1b216ca6cfe01742c *tests/testthat/test-model-class.R
7c5befb5724825f4fdf7f1d4d34c5c4a *tests/testthat/test-model-simulation.R
f29c46d4e3440d0f4be9966c8c97e29a *tests/testthat/test-parameter-class.R
4d28f963565fc5395e2bf21de5b21ca4 *tests/testthat/test-parameter-priors.R
9edc4de213d5d3194ff7d27aa5d3e17f *tests/testthat/test-parameter-variation.R
b68f9c4754aa63b9bc4879a2c491d91f *tests/testthat/test-parameter-zero-inflation.R
27f5510a99408308f8a26ff76ac4db1e *tests/testthat/test-search-executables.R
997dfbe97739e6db73842992dea926e9 *tests/testthat/test-segsites-class.R
6004410e38c14eb5fdabf72e4def55b4 *tests/testthat/test-simulator-class.R
63ed30d3dbc71ed0e67f46a59d9ff5d6 *tests/testthat/test-simulator-ms.R
778b8a1937f2351c9c56f8ae0c7cdfc6 *tests/testthat/test-simulator-msms.R
28ffc13879180c189eb7f466cb7496b8 *tests/testthat/test-simulator-scrm.R
efc273150f98fe02c6cc07b4d230ebf5 *tests/testthat/test-simulator-seqgen.R
9ad72ecab75cc3e966a7ca7c5a5497cb *tests/testthat/test-sumstat-class.R
a793d4af1da9ce8d808819a2b363d629 *tests/testthat/test-sumstat-dna.R
ba39c885977a15d68fcde5a10ad4cd58 *tests/testthat/test-sumstat-file.R
66b05429cfc125de86a0aa0fe548f8ce *tests/testthat/test-sumstat-fpc.R
258d168bba2f8339d5d28784525676ac *tests/testthat/test-sumstat-iHH.R
a16b582b4110e96d02535356e772dfa0 *tests/testthat/test-sumstat-jsfs.R
29d3ab121817e298dc7b0fe0cc2f592f *tests/testthat/test-sumstat-mcmf.R
3ff09fee645c8b18cb627d13adbc902a *tests/testthat/test-sumstat-omega.R
1498c074d080261f6978031d474b662e *tests/testthat/test-sumstat-pi.R
8d53acd4abb51f149a3237e7955346e7 *tests/testthat/test-sumstat-segsites.R
471affeef94a76b140065139955c2b89 *tests/testthat/test-sumstat-sfs.R
e31662a21e6217843ef6347ce1d5098d *tests/testthat/test-sumstat-tajimas-d.R
920da5de484ee009063a90506c5cbb4f *tests/testthat/test-sumstat-trees.R
5e9f54e9fac3e8c5e7ef80b3f94a2ae2 *tests/testthat/test-tempfile.R
cdb8356ba23ce9a8037f7b58ab9e6183 *tests/testthat/test-travis-setup.R
cc1357032a72171d980ccabfda8d0afd *vignettes/coala-abc.Rmd
bd8c45375ed608fa4ca45cfe3ef532ac *vignettes/coala-extend.Rmd
450cc2176fcf0cee20991278cb79c5ff *vignettes/coala-install.Rmd
def0d0687d48f350e293e79a1a9ce666 *vignettes/coala-intro.Rmd
