* using log directory 'd:/Rcompile/CRANpkg/local/4.5/surveycore.Rcheck' * using R version 4.5.3 (2026-03-11 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'surveycore/DESCRIPTION' ... OK * this is package 'surveycore' version '1.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'surveycore' can be installed ... OK * checking installed package size ... INFO installed size is 6.1Mb sub-directories of 1Mb or more: data 4.3Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [36s] OK * checking Rd files ... [3s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [2s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [46s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [334s] ERROR Running 'testthat.R' [334s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(surveycore) > > test_check("surveycore") i Skipped 2 surveys missing the requested variable: "w1" and "w2". # A survey_diffs result # Design: Taylor series | Family: gaussian (identity) # DV: y | Treatment: arm (ref: Ctrl) # Method: coefficient / intercept # A [2 × 4] # A tibble: 2 x 4 arm estimate mean n 1 Ctrl 0 0.5 100 2 T1 0.05 0.55 100 Saving _problems/test-analysis-diffs-helpers-478.R Saving _problems/test-analysis-diffs-helpers-668.R Saving _problems/test-analysis-diffs-helpers-669.R Saving _problems/test-analysis-diffs-helpers-876.R Saving _problems/test-analysis-diffs-helpers-1056.R Saving _problems/test-analysis-diffs-helpers-1352.R Saving _problems/test-analysis-diffs-471.R Saving _problems/test-analysis-diffs-490.R Saving _problems/test-analysis-diffs-569.R Saving _problems/test-analysis-diffs-1034.R # A survey_t_test result # Design: Taylor series | N: 400 # DV: outcome | By: grp2 (A vs. B) # A [1 × 13] # A tibble: 1 x 13 level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat df 1 A B 3.51 50.9 54.4 209 191 1.16 5.86 3.18 15 # i 2 more variables: p_value , stars # A survey_pairwise result # Design: Taylor series | N: 400 # DV: outcome | By: grp3 (3 levels, 3 pairs) # Adjustment: holm # A [3 × 13] # A tibble: 3 x 13 level_a level_b estimate mean_a mean_b n_a n_b ci_low ci_high t_stat 1 X Y -0.910 53.1 52.2 145 136 -3.59 1.77 -0.725 2 X Z -0.847 53.1 52.3 145 119 -3.77 2.08 -0.617 3 Y Z 0.0631 52.2 52.3 136 119 -2.78 2.91 0.0473 # i 3 more variables: df , p_value , stars i Skipped 2 surveys missing the requested variable: "w1" and "w2". -- Survey Design --------------------------------------------------------------- (non-probability) [experimental] * Variance: SRS approximation (no bootstrap replicate weights) Sample size: 10 # A tibble: 10 x 2 y w 1 1 1 2 2 1 3 3 1 4 4 1 5 5 1 6 6 1 7 7 1 8 8 1 9 9 1 10 10 1 -- Survey Design Summary ------------------------------------------------------- Type: non-probability [experimental] Sample size: 10 Weighted N: 10 -- Design -- Weights: w * Range: 1 – 1 * Mean: 1 * CV: 0 Calibration provenance: none stored Metadata: 0 of 2 variable(s) labeled Survey-weighted GLM Family: gaussian (identity link) Formula: y1 ~ y2 + y3 Design: Taylor series Coefficients: (Intercept) y2 y3 51.1868 -0.0624 -2.6042 Degrees of freedom: 16 (design-based) Survey-weighted GLM Call: survey_glm(design = .glm_taylor(), formula = y1 ~ y2 + y3) Deviance Residuals: Min 1Q Median 3Q Max -93.3797 -18.7253 -0.4633 22.9540 75.4878 Coefficients: Estimate Std. Error t value Pr(>|t|) (Intercept) 51.1868 0.7268 70.4262 0.0000 *** y2 -0.0624 0.8308 -0.0752 0.9412 y3 -2.6042 1.4802 -1.7594 0.1003 --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 (Dispersion parameter for gaussian family taken to be 986.9) Null deviance: 197426 on 199 degrees of freedom Residual deviance: 194412 on 197 degrees of freedom AIC: 1492 Design df: 16 (taylor) # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A # i 49 more rows # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 50 x 10 psu strata fpc wt y1 y2 y3 group prob ..surveycore_wt.. 1 psu_1 stratum~ 378 14.3 50.9 -0.122 1 A 0.0701 14.3 2 psu_1 stratum~ 378 21.8 20.1 0.188 0 B 0.0459 21.8 3 psu_1 stratum~ 378 14.4 52.8 0.119 1 B 0.0697 14.4 4 psu_2 stratum~ 378 18.9 46.3 -0.0251 0 A 0.0530 18.9 5 psu_2 stratum~ 378 23.0 51.9 0.108 0 B 0.0435 23.0 6 psu_2 stratum~ 378 11.0 55.8 -0.485 0 C 0.0908 11.0 7 psu_2 stratum~ 378 13.8 64.0 -0.504 0 A 0.0727 13.8 8 psu_2 stratum~ 378 14.2 42.7 -1.66 0 B 0.0706 14.2 9 psu_3 stratum~ 378 16.5 63.0 -0.382 1 C 0.0606 16.5 10 psu_3 stratum~ 378 13.7 53.4 -0.513 1 A 0.0728 13.7 # i 40 more rows # A tibble: 30 x 9 psu strata fpc wt y1 y2 y3 group ..surveycore_wt.. 1 psu_1 stratum_1 218 14.3 41.5 1.04 1 B 1 2 psu_1 stratum_1 218 21.8 25.9 0.921 1 B 1 3 psu_2 stratum_1 218 14.4 50.4 0.721 0 B 1 4 psu_2 stratum_1 218 18.9 52.1 -1.04 1 A 1 5 psu_2 stratum_1 218 23.0 46.4 -0.0902 0 A 1 6 psu_3 stratum_1 218 11.0 57.6 0.624 0 C 1 7 psu_3 stratum_1 218 13.7 42.7 -0.954 0 B 1 8 psu_4 stratum_1 218 14.2 36.3 -0.543 0 B 1 9 psu_4 stratum_1 218 16.5 54.3 0.581 0 C 1 10 psu_4 stratum_1 218 13.7 41.9 0.768 0 C 1 # i 20 more rows # A tibble: 50 x 13 psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3 # i 49 more rows # i 2 more variables: repwt_4 , repwt_5 # A tibble: 60 x 11 psu strata fpc wt y1 y2 y3 group subset phase1_prob 1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687 # i 59 more rows # i 1 more variable: phase2_prob # A tibble: 50 x 13 psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8 # i 40 more rows # i 2 more variables: repwt_4 , repwt_5 # A tibble: 50 x 14 psu strata fpc wt y1 y2 y3 group repwt_1 repwt_2 repwt_3 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 14.4 13.2 13.3 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 19.0 22.6 20.3 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 11.6 12.6 15.2 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 17.5 19.0 19.0 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 22.9 21.2 24.3 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 12.7 13.1 9.77 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 15.3 12.5 15.1 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 14.0 15.2 14.9 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 18.0 15.3 15.9 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A 11.8 13.1 15.8 # i 40 more rows # i 3 more variables: repwt_4 , repwt_5 , fpc_rep # A tibble: 60 x 11 psu strata fpc wt y1 y2 y3 group subset phase1_prob 1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687 2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687 3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687 4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687 5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687 6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687 7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687 8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687 9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687 10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687 # i 50 more rows # i 1 more variable: phase2_prob # A tibble: 60 x 11 psu strata fpc wt y1 y2 y3 group subset phase1_prob 1 psu_1 stratum_1 451 14.3 60.4 -2.02 0 B TRUE 0.0687 2 psu_1 stratum_1 451 21.8 59.2 -1.22 0 B FALSE 0.0687 3 psu_1 stratum_1 451 14.4 57.2 0.180 1 B FALSE 0.0687 4 psu_1 stratum_1 451 18.9 39.6 0.568 1 C TRUE 0.0687 5 psu_2 stratum_1 451 23.0 49.1 -0.493 1 A FALSE 0.0687 6 psu_2 stratum_1 451 11.0 56.2 0.0000629 0 C TRUE 0.0687 7 psu_2 stratum_1 451 13.8 40.5 1.12 0 A TRUE 0.0687 8 psu_2 stratum_1 451 14.2 44.6 1.44 0 C FALSE 0.0687 9 psu_2 stratum_1 451 16.5 55.8 -1.10 0 A TRUE 0.0687 10 psu_2 stratum_1 451 13.7 57.7 -0.117 1 B TRUE 0.0687 # i 50 more rows # i 1 more variable: phase2_prob # A tibble: 30 x 2 y w 1 0.828 2.00 2 0.0757 1.11 3 0.126 1.85 4 2.27 1.22 5 -0.838 1.30 6 -0.469 1.48 7 0.0155 1.20 8 0.961 1.41 9 -0.281 0.965 10 0.0697 1.51 # i 20 more rows # A tibble: 100 x 11 psu strata fpc wt y1 y2 y3 group subset phase1_prob 1 psu_1 stratum_1 538 11.6 50.9 -1.43 0 C FALSE 0.0967 2 psu_1 stratum_1 538 12.0 46.7 -0.718 0 C FALSE 0.0967 3 psu_1 stratum_1 538 12.1 42.0 0.205 1 A TRUE 0.0967 4 psu_1 stratum_1 538 11.6 30.8 -1.90 0 A FALSE 0.0967 5 psu_1 stratum_1 538 9.12 53.7 -0.449 0 A FALSE 0.0967 6 psu_1 stratum_1 538 10.3 56.6 0.523 0 B TRUE 0.0967 7 psu_1 stratum_1 538 9.43 69.5 -0.123 0 C FALSE 0.0967 8 psu_1 stratum_1 538 10.7 55.8 -1.11 1 B TRUE 0.0967 9 psu_1 stratum_1 538 10.5 39.5 -0.774 1 C FALSE 0.0967 10 psu_1 stratum_1 538 10.1 39.8 0.615 0 C FALSE 0.0967 # i 90 more rows # i 1 more variable: phase2_prob # A tibble: 50 x 8 psu strata fpc wt y1 y2 y3 group 1 psu_1 stratum_1 378 14.3 50.9 -0.122 1 A 2 psu_1 stratum_1 378 21.8 20.1 0.188 0 B 3 psu_1 stratum_1 378 14.4 52.8 0.119 1 B 4 psu_2 stratum_1 378 18.9 46.3 -0.0251 0 A 5 psu_2 stratum_1 378 23.0 51.9 0.108 0 B 6 psu_2 stratum_1 378 11.0 55.8 -0.485 0 C 7 psu_2 stratum_1 378 13.8 64.0 -0.504 0 A 8 psu_2 stratum_1 378 14.2 42.7 -1.66 0 B 9 psu_3 stratum_1 378 16.5 63.0 -0.382 1 C 10 psu_3 stratum_1 378 13.7 53.4 -0.513 1 A # i 40 more rows # A tibble: 10 x 6 y wt r1 r2 r3 r4 1 1 1 1 1 1 1 2 2 1 1 1 1 1 3 3 1 1 1 1 1 4 4 1 1 1 1 1 5 5 1 1 1 1 1 6 6 1 1 1 1 1 7 7 1 1 1 1 1 8 8 1 1 1 1 1 9 9 1 1 1 1 1 10 10 1 1 1 1 1 # A tibble: 10 x 6 y wt r1 r2 r3 r4 1 1 1 1 1 1 1 2 2 1 1 1 1 1 3 3 1 1 1 1 1 4 4 1 1 1 1 1 5 5 1 1 1 1 1 6 6 1 1 1 1 1 7 7 1 1 1 1 1 8 8 1 1 1 1 1 9 9 1 1 1 1 1 10 10 1 1 1 1 1 # A tibble: 10 x 6 y wt r1 r2 r3 r4 1 1 1 1 1 1 1 2 2 1 1 1 1 1 3 3 1 1 1 1 1 4 4 1 1 1 1 1 5 5 1 1 1 1 1 6 6 1 1 1 1 1 7 7 1 1 1 1 1 8 8 1 1 1 1 1 9 9 1 1 1 1 1 10 10 1 1 1 1 1 # A tibble: 10 x 6 y wt r1 r2 r3 r4 1 1 1 1 1 1 1 2 2 1 1 1 1 1 3 3 1 1 1 1 1 4 4 1 1 1 1 1 5 5 1 1 1 1 1 6 6 1 1 1 1 1 7 7 1 1 1 1 1 8 8 1 1 1 1 1 9 9 1 1 1 1 1 10 10 1 1 1 1 1 # A tibble: 10 x 2 y wt 1 1 1 2 2 1 3 3 1 4 4 1 5 5 1 6 6 1 7 7 1 8 8 1 9 9 1 10 10 1 -- Survey Design --------------------------------------------------------------- (non-probability, JK1, 4 replicates) [experimental] Sample size: 10 # A tibble: 10 x 6 y wt r1 r2 r3 r4 1 1 1 1 1 1 1 2 2 1 1 1 1 1 3 3 1 1 1 1 1 4 4 1 1 1 1 1 5 5 1 1 1 1 1 6 6 1 1 1 1 1 7 7 1 1 1 1 1 8 8 1 1 1 1 1 9 9 1 1 1 1 1 10 10 1 1 1 1 1 i Skipped 2 surveys missing the requested variable: "w1" and "w2". i Skipped 1 survey missing the requested variable: "only". [ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ] ══ Skipped tests (426) ═════════════════════════════════════════════════════════ • A-13 trigger requires careful numerical construction; tracked for follow-up PR (1): 'test-glm-anova.R:531:3' • A-20 requires a hand-built fit whose @design@data domain column differs from the refit's; deferred to follow-up PR (1): 'test-glm-anova.R:481:3' • On CRAN (422): 'test-analysis-corr-latent-primitives.R:74:1', 'test-analysis-corr-latent-primitives.R:97:1', 'test-analysis-corr-latent-primitives.R:152:1', 'test-analysis-corr-latent-primitives.R:348:1', 'test-analysis-corr-latent-primitives.R:482:1', 'test-analysis-corr-latent-primitives.R:741:1', 'test-analysis-corr-latent-variance.R:14:1', 'test-analysis-corr-latent.R:20:1', 'test-analysis-corr.R:809:1', 'test-analysis-corr.R:817:1', 'test-analysis-corr.R:1231:1', 'test-analysis-corr.R:1646:1', 'test-analysis-corr.R:1664:1', 'test-analysis-covariance.R:690:1', 'test-analysis-covariance.R:699:1', 'test-analysis-covariance.R:712:1', 'test-analysis-covariance.R:734:1', 'test-analysis-covariance.R:747:1', 'test-analysis-covariance.R:768:1', 'test-analysis-covariance.R:785:1', 'test-analysis-covariance.R:798:1', 'test-analysis-covariance.R:819:1', 'test-analysis-covariance.R:851:1', 'test-analysis-covariance.R:884:1', 'test-analysis-covariance.R:924:1', 'test-analysis-covariance.R:1131:1', 'test-analysis-covariance.R:1154:1', 'test-analysis-covariance.R:1176:1', 'test-analysis-diffs-helpers.R:147:1', 'test-analysis-diffs-helpers.R:388:1', 'test-analysis-diffs-marginaleffects.R:6:1', 'test-analysis-diffs-numerical.R:6:1', 'test-analysis-diffs.R:30:1', 'test-analysis-diffs.R:39:1', 'test-analysis-diffs.R:48:1', 'test-analysis-diffs.R:57:1', 'test-analysis-diffs.R:66:1', 'test-analysis-diffs.R:77:1', 'test-analysis-diffs.R:89:1', 'test-analysis-diffs.R:101:1', 'test-analysis-diffs.R:435:1', 'test-analysis-diffs.R:765:1', 'test-analysis-diffs.R:774:1', 'test-analysis-diffs.R:783:1', 'test-analysis-diffs.R:792:1', 'test-analysis-diffs.R:801:1', 'test-analysis-diffs.R:810:1', 'test-analysis-freqs.R:578:1', 'test-analysis-freqs.R:589:1', 'test-analysis-freqs.R:610:1', 'test-analysis-freqs.R:631:1', 'test-analysis-freqs.R:652:1', 'test-analysis-freqs.R:1255:1', 'test-analysis-freqs.R:1499:1', 'test-analysis-helpers.R:59:1', 'test-analysis-helpers.R:77:1', 'test-analysis-helpers.R:110:1', 'test-analysis-helpers.R:398:1', 'test-analysis-helpers.R:754:1', 'test-analysis-helpers.R:1113:1', 'test-analysis-helpers.R:1153:1', 'test-analysis-helpers.R:1462:1', 'test-analysis-means.R:320:1', 'test-analysis-means.R:349:1', 'test-analysis-means.R:812:1', 'test-analysis-quantiles.R:716:1', 'test-analysis-quantiles.R:724:1', 'test-analysis-quantiles.R:759:1', 'test-analysis-quantiles.R:771:1', 'test-analysis-quantiles.R:1095:1', 'test-analysis-ratios.R:578:1', 'test-analysis-ratios.R:588:1', 'test-analysis-ratios.R:598:1', 'test-analysis-ratios.R:608:1', 'test-analysis-ratios.R:1040:1', 'test-analysis-t-test-numerical.R:6:1', 'test-analysis-t-test.R:285:1', 'test-analysis-t-test.R:310:1', 'test-analysis-t-test.R:319:1', 'test-analysis-t-test.R:328:1', 'test-analysis-t-test.R:340:1', 'test-analysis-t-test.R:352:1', 'test-analysis-t-test.R:364:1', 'test-analysis-t-test.R:377:1', 'test-analysis-t-test.R:393:1', 'test-analysis-t-test.R:402:1', 'test-analysis-t-test.R:414:1', 'test-analysis-t-test.R:426:1', 'test-analysis-t-test.R:754:1', 'test-analysis-t-test.R:820:1', 'test-analysis-t-test.R:831:1', 'test-analysis-totals.R:301:1', 'test-analysis-totals.R:320:1', 'test-analysis-totals.R:624:1', 'test-analysis-variance-collection.R:122:1', 'test-analysis-variance-collection.R:146:1', 'test-analysis-variance-collection.R:169:1', 'test-analysis-variance-collection.R:182:1', 'test-analysis-variance-twophase-nonprob.R:9:1', 'test-analysis-variance.R:598:1', 'test-analysis-variance.R:608:1', 'test-analysis-variance.R:622:1', 'test-analysis-variance.R:634:1', 'test-analysis-variance.R:646:1', 'test-analysis-variance.R:657:1', 'test-analysis-variance.R:676:1', 'test-analysis-variance.R:691:1', 'test-analysis-variance.R:705:1', 'test-calibration.R:73:1', 'test-calibration.R:84:1', 'test-calibration.R:96:1', 'test-calibration.R:108:1', 'test-calibration.R:120:1', 'test-calibration.R:132:1', 'test-calibration.R:144:1', 'test-calibration.R:156:1', 'test-calibration.R:170:1', 'test-calibration.R:182:1', 'test-calibration.R:194:1', 'test-calibration.R:207:1', 'test-calibration.R:223:1', 'test-calibration.R:238:1', 'test-calibration.R:264:1', 'test-calibration.R:737:1', 'test-calibration.R:748:1', 'test-calibration.R:762:1', 'test-calibration.R:776:1', 'test-calibration.R:788:1', 'test-calibration.R:802:1', 'test-calibration.R:840:1', 'test-calibration.R:854:1', 'test-calibration.R:866:1', 'test-calibration.R:878:1', 'test-calibration.R:893:1', 'test-calibration.R:906:1', 'test-calibration.R:919:1', 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'test-glm-anova.R:811:1', 'test-glm-anova.R:822:1', 'test-glm-anova.R:833:1', 'test-glm-anova.R:859:1', 'test-glm-anova.R:871:1', 'test-glm-anova.R:919:1', 'test-glm-marginaleffects.R:9:1', 'test-glm-methods.R:52:1', 'test-glm-methods.R:109:1', 'test-glm-methods.R:115:1', 'test-glm-methods.R:205:1', 'test-glm-methods.R:289:1', 'test-glm-methods.R:299:1', 'test-glm-methods.R:312:1', 'test-glm-methods.R:325:1', 'test-glm-methods.R:392:1', 'test-glm-methods.R:424:1', 'test-glm-methods.R:449:1', 'test-glm-methods.R:474:1', 'test-glm-methods.R:526:1', 'test-glm-methods.R:548:1', 'test-glm-methods.R:575:1', 'test-glm-methods.R:584:1', 'test-glm-methods.R:611:1', 'test-glm-methods.R:660:1', 'test-glm-methods.R:675:1', 'test-glm-numerical.R:14:1', 'test-glm.R:128:1', 'test-glm.R:177:1', 'test-glm.R:186:1', 'test-glm.R:196:1', 'test-glm.R:206:1', 'test-glm.R:219:1', 'test-glm.R:229:1', 'test-glm.R:239:1', 'test-glm.R:249:1', 'test-glm.R:261:1', 'test-glm.R:273:1', 'test-glm.R:309:1', 'test-glm.R:325:1', 'test-glm.R:1007:1', 'test-glm.R:1015:1', 'test-glm.R:1288:1', 'test-metadata-infer.R:408:1', 'test-metadata-system.R:187:1', 'test-metadata-system.R:709:1', 'test-metadata-system.R:713:1', 'test-metadata-system.R:721:1', 'test-metadata-system.R:726:1', 'test-metadata-system.R:734:1', 'test-metadata-system.R:739:1', 'test-metadata-system.R:744:1', 'test-metadata-system.R:749:1', 'test-metadata-system.R:925:1', 'test-metadata-system.R:930:1', 'test-metadata-system.R:935:1', 'test-metadata-system.R:939:1', 'test-metadata-system.R:944:1', 'test-metadata-system.R:952:1', 'test-metadata-system.R:960:1', 'test-metadata-system.R:965:1', 'test-metadata-system.R:1107:1', 'test-metadata-system.R:1114:1', 'test-metadata-system.R:1119:1', 'test-metadata-system.R:1127:1', 'test-metadata-system.R:1132:1', 'test-metadata-system.R:1140:1', 'test-metadata-system.R:1145:1', 'test-metadata-system.R:1278:1', 'test-metadata-system.R:1282:1', 'test-metadata-system.R:1290:1', 'test-metadata-system.R:1295:1', 'test-metadata-system.R:1303:1', 'test-metadata-system.R:1308:1', 'test-metadata-system.R:1313:1', 'test-metadata-system.R:1439:1', 'test-metadata-system.R:1443:1', 'test-metadata-system.R:1448:1', 'test-metadata-system.R:1456:1', 'test-metadata-system.R:1461:1', 'test-metadata-system.R:1469:1', 'test-metadata-system.R:1474:1', 'test-metadata-system.R:1623:1', 'test-metadata-system.R:1628:1', 'test-metadata-system.R:1635:1', 'test-metadata-system.R:1643:1', 'test-metadata-system.R:1648:1', 'test-metadata-system.R:1660:1', 'test-metadata-system.R:1665:1', 'test-metadata-system.R:1887:1', 'test-metadata-system.R:2040:1', 'test-metadata-system.R:2054:1', 'test-metadata-system.R:2068:1', 'test-metadata-system.R:2082:1', 'test-metadata-system.R:2202:1', 'test-metadata-system.R:2438:1', 'test-metadata-system.R:2442:1', 'test-metadata-system.R:2622:1', 'test-metadata-system.R:2630:1', 'test-metadata-system.R:2648:1', 'test-metadata-system.R:2663:1', 'test-metadata-system.R:2678:1', 'test-metadata-system.R:2858:1', 'test-metadata-system.R:2866:1', 'test-metadata-system.R:2881:1', 'test-metadata-system.R:2896:1', 'test-metadata-system.R:3079:1', 'test-metadata-system.R:3087:1', 'test-metadata-system.R:3095:1', 'test-metadata-system.R:3110:1', 'test-metadata-system.R:3128:1', 'test-metadata-system.R:3146:1', 'test-metadata-system.R:3164:1', 'test-metadata-system.R:3179:1', 'test-metadata-system.R:3356:1', 'test-metadata-system.R:3364:1', 'test-metadata-system.R:3372:1', 'test-metadata-system.R:3390:1', 'test-metadata-system.R:3408:1', 'test-metadata-system.R:3426:1', 'test-metadata-system.R:3441:1', 'test-metadata-system.R:3506:1', 'test-metadata-system.R:3517:1', 'test-methods-print.R:107:1', 'test-methods-print.R:118:1', 'test-methods-print.R:224:1', 'test-methods-print.R:235:1', 'test-methods-print.R:255:1', 'test-methods-print.R:266:1', 'test-methods-print.R:286:1', 'test-methods-print.R:331:1', 'test-methods-print.R:348:1', 'test-methods-print.R:375:1', 'test-methods-print.R:386:1', 'test-methods-print.R:398:1', 'test-methods-print.R:410:1', 'test-methods-print.R:421:1', 'test-methods-print.R:432:1', 'test-methods-print.R:447:1', 'test-methods-print.R:462:1', 'test-methods-print.R:652:1', 'test-methods-print.R:680:1', 'test-methods-print.R:702:1', 'test-methods-print.R:723:1', 'test-methods-print.R:736:1', 'test-methods-print.R:749:1', 'test-methods-print.R:756:1', 'test-methods-print.R:866:1', 'test-methods-print.R:878:1', 'test-methods-print.R:891:1', 'test-methods-print.R:904:1', 'test-methods-print.R:964:1', 'test-methods-print.R:976:1', 'test-methods-print.R:989:1', 'test-methods-print.R:1002:1', 'test-nonprob-bootstrap-variance.R:585:1', 'test-sata-detection.R:178:1', 'test-sata-detection.R:193:1', 'test-sata-detection.R:211:1', 'test-survey-collection-dispatch.R:319:1', 'test-survey-collection-dispatch.R:343:1', 'test-survey-collection-dispatch.R:366:1', 'test-survey-collection-dispatch.R:379:1', 'test-survey-collection-dispatch.R:389:1', 'test-survey-collection-dispatch.R:399:1', 'test-survey-collection-dispatch.R:424:1', 'test-survey-collection-dispatch.R:446:1', 'test-survey-collection-dispatch.R:559:1', 'test-survey-collection-dispatch.R:819:1', 'test-survey-collection.R:187:1', 'test-survey-collection.R:236:1', 'test-survey-collection.R:381:1', 'test-survey-collection.R:455:1', 'test-survey-collection.R:714:1', 'test-survey-collection.R:742:1', 'test-survey-collection.R:1008:1', 'test-survey-collection.R:1014:1', 'test-survey-collection.R:1025:1', 'test-update-design.R:284:1', 'test-utils.R:640:1', 'test-validators.R:354:1', 'test-validators.R:376:1', 'test-validators.R:398:1', 'test-variance-taylor.R:308:1', 'test-variance-twophase.R:5:1', 'test-variance-vendored-saddlepoint.R:9:1' • Set SURVEYCORE_EXTENDED_TESTS=true to run extended tests (1): 'test-srr-compliance.R:294:3' • {MASS} is not installed (1): 'test-calibration.R:633:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-analysis-diffs-helpers.R:478:3'): .extract_me_estimates() with groups: result_groups is a data.frame ── Expected `nrow(result$result_groups)` to equal 4L. Differences: `actual`: 3 `expected`: 4 ── Failure ('test-analysis-diffs-helpers.R:668:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ── Expected `nrow(out$groups_df)` to equal 6L. Differences: `actual`: 5 `expected`: 6 ── Failure ('test-analysis-diffs-helpers.R:669:3'): .build_diffs_output() grouped path: groups_df has correct columns and row count ── Expected `length(out$col_vecs[["treats"]])` to equal 6L. Differences: `actual`: 5 `expected`: 6 ── Error ('test-analysis-diffs-helpers.R:858:3'): .build_diffs_output() p-value adjustment with groups: adjusts within each group ── Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:858:3 2. │ └─base::withCallingHandlers(...) 3. └─surveycore:::.build_diffs_output(...) ── Error ('test-analysis-diffs-helpers.R:1038:3'): .build_diffs_output() pct_change with show_means = FALSE + grouped ME + show_pct_change = TRUE: pct_change computed (not NA) ── Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1038:3 2. │ └─base::withCallingHandlers(...) 3. └─surveycore:::.build_diffs_output(...) ── Error ('test-analysis-diffs-helpers.R:1334:3'): .build_diffs_output() grouped path with pct_change: group combo loop hits has_group branch ── Error in `if (grp_ok) { ref_mean_val <- all_rows[[ri]]$mean break }`: missing value where TRUE/FALSE needed Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-analysis-diffs-helpers.R:1334:3 2. │ └─base::withCallingHandlers(...) 3. └─surveycore:::.build_diffs_output(...) ── Failure ('test-analysis-diffs.R:471:3'): get_diffs() with group produces grouped output ── Expected `nrow(result)` to equal 6L. Differences: `actual`: 5 `expected`: 6 ── Failure ('test-analysis-diffs.R:490:3'): get_diffs() with covariates and group ── Expected `nrow(result)` to equal 6L. Differences: `actual`: 5 `expected`: 6 ── Error ('test-analysis-diffs.R:562:3'): get_diffs() pval_adj with group adjusts within groups ── Error in `if (grp_match) { comp_idx <- c(comp_idx, ri) }`: missing value where TRUE/FALSE needed Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:562:3 2. │ └─base::withCallingHandlers(...) 3. └─surveycore::get_diffs(...) 4. └─surveycore:::.build_diffs_output(...) ── Error ('test-analysis-diffs.R:1026:3'): get_diffs() pct_change is non-NA with show_means = FALSE (grouped) ── Error in `if (match_g) { combo_idx <- gi break }`: missing value where TRUE/FALSE needed Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-analysis-diffs.R:1026:3 2. │ └─base::withCallingHandlers(...) 3. └─surveycore::get_diffs(...) 4. └─surveycore:::.build_diffs_output(...) [ FAIL 10 | WARN 335 | SKIP 426 | PASS 11128 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [46s] OK * checking PDF version of manual ... [28s] OK * checking HTML version of manual ... [23s] OK * DONE Status: 1 ERROR