Search and Explore BOLD Data Packages Efficiently

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Documentation for package ‘BOLDNODE’ version 1.0.0

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package README

Help Pages

bcdm_field_names	Retrieve BCDM field names and descriptions
bcdm_field_values	Extract unique values from BCDM fields in the BOLD data package
bcdm_to_dnastringset	Convert the BOLD parquet search into a DNAStringSet object
bcdm_to_dwc	Convert the BOLD parquet search in to a Darwin Core (DwC) format data model
bcdm_to_fasta	Export the BOLD parquet search to FASTA format
bcdm_to_occmatrix	Convert the BOLD parquet search into an occurrence matrix
bcdm_to_sf	Convert the BOLD parquet search into a simple features dataframe
bold_parquet_search	Search records within a BOLD parquet data package
bold_search_collect	Collect and export parquet search results
get_bin_consensus	Compute consensus BIN taxonomy
get_bin_reps	Select representative records by BIN
get_concise_summary	Generate a concise summary of the search results