The ‘mumarinex’ package aims to facilitate the computation of the multivariate marine recovery index, providing functions for data visualization and ecological diagnostics of marine ecosystems. The computational details are described in the original publication (please, see below for reference).
You can install the development version of mumarinex from CRAN or from GitHub, respectively with:
install.packages("mumarinex") # CRAN
devtools::install_github("Nathan-Chauvel/mumarinex") # GitHub| Name | Short description |
|---|---|
decomplot() |
Generates a graphical representation of MUMARINEX sub-indices. |
diagnostic_tool() |
Identifies, for each sub-index, the species/taxa that most contribute to its variation.. |
mumarinex() |
Computes the MUMARINEX index and its sub-indices (SCSR, CBCS, and SPI). |
mum_GUI() |
Launch the online Graphical User Interface to compute the MUMARINEX index and its sub-indices. |
Chauvel, N., Grall, J., Thiébaut, E., Houbin, C., Pezy, J.-P., 2026. A general-purpose multivariate marine recovery index (MUMARINEX) for quantifying the influence of human activities on benthic habitat ecological status. Ecological Indicators 188, 115002. https://doi.org/10.1016/j.ecolind.2026.115002