Last updated on 2026-06-07 20:51:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9.2 | 5.64 | 107.11 | 112.75 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.9.2 | 3.49 | 62.46 | 65.95 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.9.2 | 9.00 | 168.77 | 177.77 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.9.2 | 9.00 | 173.79 | 182.79 | OK | |
| r-devel-windows-x86_64 | 0.9.2 | 7.00 | 225.00 | 232.00 | OK | |
| r-patched-linux-x86_64 | 0.9.2 | 4.82 | 93.08 | 97.90 | OK | |
| r-release-linux-x86_64 | 0.9.2 | 4.80 | 92.45 | 97.25 | OK | |
| r-release-macos-arm64 | 0.9.2 | 1.00 | 35.00 | 36.00 | OK | |
| r-release-macos-x86_64 | 0.9.2 | 4.00 | 121.00 | 125.00 | OK | |
| r-release-windows-x86_64 | 0.9.2 | 10.00 | 196.00 | 206.00 | OK | |
| r-oldrel-macos-arm64 | 0.9.2 | OK | ||||
| r-oldrel-macos-x86_64 | 0.9.2 | 4.00 | 133.00 | 137.00 | OK | |
| r-oldrel-windows-x86_64 | 0.9.2 | 10.00 | 205.00 | 215.00 | OK |
Version: 0.9.2
Check: Rd files
Result: WARN
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
cannot open the connection
problems found in ‘forcings_init.Rd’, ‘funs.Rd’, ‘generate.Rd’, ‘getPars.Rd’, ‘getVars.Rd’, ‘initStepper.Rd’, ‘initialize.Rd’, ‘libFunc.Rd’, ‘libName.Rd’, ‘pars.Rd’, ‘plotStoichiometry.Rd’, ‘pros.Rd’, ‘rodeo-class.Rd’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.9.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘rodeoVignette.Rmd’ using rmarkdown
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44177fd391e6.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44177fd391e6.o
/tmp/Rtmpa2tYpM/rodeo1b44177fd391e6.f95:59:17:
59 | subroutine drvs(time, var, par, NBOX, dydt, pro)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b441738b1a658.f95 -o /tmp/Rtmpa2tYpM/rodeo1b441738b1a658.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b44172219f2a1.so /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.o /tmp/Rtmpa2tYpM/rodeo1b44177fd391e6.o /tmp/Rtmpa2tYpM/rodeo1b441738b1a658.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44177bb7812c.f95 -o /tmp/Rtmpa2tYpM/file1b44177bb7812c.o
/tmp/Rtmpa2tYpM/file1b44177bb7812c.f95:207:24:
207 | character(len=256):: errmsg
| 1~~~~~
Warning: Unused variable ‘errmsg’ declared at (1) [-Wunused-variable]
/tmp/Rtmpa2tYpM/file1b44177bb7812c.f95:296:12:
296 | end function
| ^
Warning: ‘res’ may be used uninitialized [-Wmaybe-uninitialized]
/tmp/Rtmpa2tYpM/file1b44177bb7812c.f95:277:33:
277 | function Tamb (time) result (res)
| ^
note: ‘res’ was declared here
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44175814ed43.f95 -o /tmp/Rtmpa2tYpM/file1b44175814ed43.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44176fc1d0e9.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44176fc1d0e9.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b441772cb659c.f95 -o /tmp/Rtmpa2tYpM/rodeo1b441772cb659c.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b44176c3e56a5.so /tmp/Rtmpa2tYpM/file1b44177bb7812c.o /tmp/Rtmpa2tYpM/file1b44175814ed43.o /tmp/Rtmpa2tYpM/rodeo1b44176fc1d0e9.o /tmp/Rtmpa2tYpM/rodeo1b441772cb659c.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b4417124f3dbc.f95 -o /tmp/Rtmpa2tYpM/rodeo1b4417124f3dbc.o
/tmp/Rtmpa2tYpM/rodeo1b4417124f3dbc.f95:77:17:
77 | subroutine drvs(time, var, par, NBOX, dydt, pro)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b441712f44bc.f95 -o /tmp/Rtmpa2tYpM/rodeo1b441712f44bc.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b441717fcba3d.so /tmp/Rtmpa2tYpM/rodeo1b4417124f3dbc.o /tmp/Rtmpa2tYpM/rodeo1b441712f44bc.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44174b4cfb35.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44174b4cfb35.o
/tmp/Rtmpa2tYpM/rodeo1b44174b4cfb35.f95:53:17:
53 | subroutine drvs(time, var, par, NBOX, dydt, pro)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44173b4a40a5.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44173b4a40a5.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b44176ddfe009.so /tmp/Rtmpa2tYpM/rodeo1b44174b4cfb35.o /tmp/Rtmpa2tYpM/rodeo1b44173b4a40a5.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/advectionDispersion/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/advectionDispersion/functions.o
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/advectionDispersion/functions.f95:14:17:
14 | function cDn (time) result (r)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/advectionDispersion/functions.f95:8:17:
8 | function cUp (time) result (r)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44171fb1e6a3.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44171fb1e6a3.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44176b7390a2.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44176b7390a2.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b44173613152b.so /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/advectionDispersion/functions.o /tmp/Rtmpa2tYpM/rodeo1b44171fb1e6a3.o /tmp/Rtmpa2tYpM/rodeo1b44176b7390a2.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/groundwater/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/groundwater/functions.o
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/groundwater/functions.f95:23:35:
23 | double precision function hRiv (time)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/groundwater/functions.f95:18:34:
18 | double precision function rch (time)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44175addc490.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44175addc490.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44172fe6183b.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44172fe6183b.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b44174da6f803.so /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/groundwater/functions.o /tmp/Rtmpa2tYpM/rodeo1b44175addc490.o /tmp/Rtmpa2tYpM/rodeo1b44172fe6183b.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/tetracycline/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/tetracycline/functions.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44172b642e8.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44172b642e8.o
/tmp/Rtmpa2tYpM/rodeo1b44172b642e8.f95:159:17:
159 | subroutine drvs(time, var, par, NBOX, dydt, pro)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b441754b591ee.f95 -o /tmp/Rtmpa2tYpM/rodeo1b441754b591ee.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b441770f48d53.so /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/1D/tetracycline/functions.o /tmp/Rtmpa2tYpM/rodeo1b44172b642e8.o /tmp/Rtmpa2tYpM/rodeo1b441754b591ee.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.o
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:18:15:
18 | function sInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:12:15:
12 | function xInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:6:12:
6 | function q(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b441768399225.f95 -o /tmp/Rtmpa2tYpM/rodeo1b441768399225.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/rodeo1b44171a534641.f95 -o /tmp/Rtmpa2tYpM/rodeo1b44171a534641.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rodeo1b441746ff94e9.so /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.o /tmp/Rtmpa2tYpM/rodeo1b441768399225.o /tmp/Rtmpa2tYpM/rodeo1b44171a534641.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b4417728a31bb.f95 -o /tmp/Rtmpa2tYpM/file1b4417728a31bb.o
/tmp/Rtmpa2tYpM/file1b4417728a31bb.f95:269:11:
269 | integer:: i
| 1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/tmp/Rtmpa2tYpM/file1b4417728a31bb.f95:301:6:
301 | if (abs(hnext) .lt. hmin) then
| ^
Warning: ‘hnext’ may be used uninitialized [-Wmaybe-uninitialized]
/tmp/Rtmpa2tYpM/file1b4417728a31bb.f95:266:27:
266 | double precision:: h,hdid,hnext,x
| ^~~~~
note: ‘hnext’ was declared here
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.o
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:18:15:
18 | function sInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:12:15:
12 | function xInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:6:12:
6 | function q(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44174375fa78.f95 -o /tmp/Rtmpa2tYpM/file1b44174375fa78.o
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b441767f011a8.f95 -o /tmp/Rtmpa2tYpM/file1b441767f011a8.o
/tmp/Rtmpa2tYpM/file1b441767f011a8.f95:18:43:
18 | double precision, dimension(NVAR*NBOX), intent(in):: var
| 1
Warning: GNU Extension: Symbol ‘nbox’ is used before it is typed at (1)
/tmp/Rtmpa2tYpM/file1b441767f011a8.f95:19:43:
19 | double precision, dimension(NPAR*NBOX), intent(in):: par
| 1
Warning: GNU Extension: Symbol ‘nbox’ is used before it is typed at (1)
/tmp/Rtmpa2tYpM/file1b441767f011a8.f95:30:42:
30 | subroutine derivs_wrapped(t,u,par,dudt,error)
| 1~~~~
Warning: Dummy argument ‘error’ at (1) was declared INTENT(OUT) but was not set [-Wunused-dummy-argument]
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o /tmp/Rtmpa2tYpM/rk51b441715cc186e.so /tmp/Rtmpa2tYpM/file1b4417728a31bb.o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.o /tmp/Rtmpa2tYpM/file1b44174375fa78.o /tmp/Rtmpa2tYpM/file1b441767f011a8.o -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-1) 16.1.0’
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44174fdc53a1.f95 -o /tmp/Rtmpa2tYpM/file1b44174fdc53a1.o
/tmp/Rtmpa2tYpM/file1b44174fdc53a1.f95:269:11:
269 | integer:: i
| 1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/tmp/Rtmpa2tYpM/file1b44174fdc53a1.f95:301:6:
301 | if (abs(hnext) .lt. hmin) then
| ^
Warning: ‘hnext’ may be used uninitialized [-Wmaybe-uninitialized]
/tmp/Rtmpa2tYpM/file1b44174fdc53a1.f95:266:27:
266 | double precision:: h,hdid,hnext,x
| ^~~~~
note: ‘hnext’ was declared here
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95 -o /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.o
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:18:15:
18 | function sInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:12:15:
12 | function xInf(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/rodeo.Rcheck/vign_test/rodeo/vignettes/examples/linked/waterSediment/functions.f95:6:12:
6 | function q(time) result (res)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44176a86e318.f95 -o /tmp/Rtmpa2tYpM/file1b44176a86e318.o
/tmp/Rtmpa2tYpM/file1b44176a86e318.f95:64:19:
64 | subroutine derivs(time, var, par, NBOX, dydt, pro)
| 1~~~
Warning: Unused dummy argument ‘time’ at (1) [-Wunused-dummy-argument]
gfortran-16 -fpic -g -O2 -Wall -pedantic -mtune=native -c /tmp/Rtmpa2tYpM/file1b44176720e616.f95 -o /tmp/Rtmpa2tYpM/file1b44176720e616.o
Cannot create temporary file in /tmp/: No space left on device
make[1]: *** [/home/hornik/tmp/R.check/r-devel-gcc/Work/build/etc/Makeconf:216: /tmp/Rtmpa2tYpM/file1b44176720e616.o] Aborted
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
make[1]: Entering directory '/tmp/Rtmpa2tYpM'
make[1]: Leaving directory '/tmp/Rtmpa2tYpM'
Quitting from rodeoVignette.Rmd:1435-1436 [unnamed-chunk-95]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `models[[obj]]$initStepper()`:
! Failed to build shared library.
---
Backtrace:
x
1. \-models[[obj]]$initStepper("functions.f95", method = "rk5")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'rodeoVignette.Rmd' failed with diagnostics:
Failed to build shared library.
--- failed re-building ‘rodeoVignette.Rmd’
SUMMARY: processing the following file failed:
‘rodeoVignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc