Last updated on 2025-11-07 03:50:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.31 | 197.01 | 207.32 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 182.00 | 193.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 172.00 | 185.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/134s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.741, system: 0.071, elapsed: 2.648 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.766, system: 0.217, elapsed: 15.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.019, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.119, system: 0.270, elapsed: 6.187 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.006, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.598, system: 0.613, elapsed: 25.330 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.683, system: 0.064, elapsed: 2.610 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.568, system: 0.113, elapsed: 14.124 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.414 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.050, system: 0.209, elapsed: 7.514 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.006, elapsed: 0.316 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.249, system: 0.441, elapsed: 25.853 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.703, system: 0.046, elapsed: 3.129 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.029, system: 0.392, elapsed: 16.472 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.019, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.491, system: 0.385, elapsed: 7.437 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.010, elapsed: 0.296 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.318, system: 0.281, elapsed: 1.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.612, system: 1.175, elapsed: 30.080 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.863, system: 0.109, elapsed: 2.873 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.659, system: 0.099, elapsed: 15.080 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.014, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.012, system: 0.201, elapsed: 6.826 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.384 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.001, system: 0.495, elapsed: 18.112 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.621, system: 0.964, elapsed: 44.741 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.747, system: 0.073, elapsed: 2.704 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.579, system: 0.189, elapsed: 14.563 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.014, elapsed: 0.335 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.722, system: 0.183, elapsed: 5.351 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.011, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.986, system: 0.501, elapsed: 24.074 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.037, elapsed: 2.393 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.669, system: 0.121, elapsed: 17.340 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.014, elapsed: 0.425 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.803, system: 0.193, elapsed: 5.654 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.008, elapsed: 0.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.075, system: 0.413, elapsed: 26.950 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.640, system: 0.049, elapsed: 2.144 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.948, system: 0.378, elapsed: 14.228 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.017, elapsed: 0.247 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.176, system: 0.280, elapsed: 4.900 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.018, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.197, system: 0.295, elapsed: 0.954 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.051, system: 1.084, elapsed: 23.626 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.040, elapsed: 2.525 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.795, system: 0.124, elapsed: 14.776 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.369 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.949, system: 0.202, elapsed: 6.314 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.006, elapsed: 0.270 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.655, system: 0.485, elapsed: 14.845 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.140, system: 0.899, elapsed: 40.122 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64