Last updated on 2026-10-11 13:51:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.7 | 7.89 | 64.30 | 72.19 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.7 | 6.01 | 49.60 | 55.61 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.8 | 82.88 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.8 | 79.84 | OK | |||
| r-devel-windows-x86_64 | 1.7 | 11.00 | 84.00 | 95.00 | OK | |
| r-patched-linux-x86_64 | 1.7 | 7.94 | 62.07 | 70.01 | OK | |
| r-release-linux-x86_64 | 1.7 | 8.29 | 61.91 | 70.20 | OK | |
| r-release-macos-arm64 | 1.8 | 3.00 | 22.00 | 25.00 | ERROR | |
| r-release-macos-x86_64 | 1.8 | 8.00 | 184.00 | 192.00 | OK | |
| r-release-windows-x86_64 | 1.7 | 11.00 | 76.00 | 87.00 | OK | |
| r-oldrel-macos-arm64 | 1.8 | 5.00 | 35.00 | 40.00 | ERROR | |
| r-oldrel-macos-x86_64 | 1.8 | 7.00 | 101.00 | 108.00 | OK | |
| r-oldrel-windows-x86_64 | 1.7 | 15.00 | 93.00 | 108.00 | OK |
Version: 1.7
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Luiz Henrique Keng Queiroz Junior <keng@ufg.br>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Luiz", "Henrique", "Keng", "Queiroz"),
family = "Junior",
role = c("aut", "cre"),
email = "keng@ufg.br"),
person(given = c("Vitor", "Mendes"),
family = "de Oliveira",
role = "aut"))
as necessary.
The BugReports field in DESCRIPTION has
https://github.com/vitor-mendes-iq/iSTATS
which should likely be
https://github.com/vitor-mendes-iq/iSTATS/issues
instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.8
Check: tests
Result: ERROR
Running ‘alignment-regions.R’ [1s/1s]
Running ‘app-helpers.R’ [1s/1s]
Running the tests in ‘tests/app-helpers.R’ failed.
Complete output:
> library(iSTATS)
Loading required package: shinyBS
Loading required package: shinyWidgets
>
> app_functions <- system.file("app", "functions.R", package = "iSTATS")
> stopifnot(nzchar(app_functions))
> helpers <- new.env(parent = globalenv())
> sys.source(app_functions, envir = helpers)
>
> set.seed(42)
> x <- matrix(rnorm(120), 12, 10)
> x[, 2] <- -x[, 1]
> cases <- list(
+ random = x,
+ ties = round(x),
+ single = x[, 1, drop = FALSE],
+ one_sample = x[1, , drop = FALSE],
+ constant = cbind(x, 1),
+ missing = replace(x, c(1, 20), NA_real_)
+ )
>
> for (m in cases) {
+ for (method in c("pearson", "spearman")) {
+ reference <- suppressWarnings(stats::cor(m, method = method))
+ for (driver in seq_len(ncol(m))) {
+ actual <- suppressWarnings(helpers$driver_correlations(m, driver)[[method]])
+ stopifnot(isTRUE(all.equal(actual, unname(reference[driver, ]),
+ tolerance = 1e-14)))
+ }
+ }
+ }
>
> # The vectorized Shapiro-Wilk and rank helpers must equal, bit for bit, one
> # shapiro.test()/rank() call per column: small n branches, ties, constant and
> # tiny-range columns, missing/infinite values and invalid sample sizes.
> reference_p <- function(m) vapply(seq_len(ncol(m)), function(h)
+ tryCatch(stats::shapiro.test(m[, h])$p.value, error = function(e) NA_real_), 0)
> reference_ranks <- function(m)
+ if (nrow(m) > 1L) apply(m, 2L, rank, na.last = "keep") else row(m)
> shapiro_cases <- list(matrix(rnorm(2 * 4), 2), matrix(rnorm(5001 * 2), 5001))
> for (n in c(3:12, 20, 52)) {
+ y <- matrix(rexp(n * 40), n)
+ y[, 2] <- round(y[, 2])
+ y[, 3] <- 1
+ y[, 4] <- y[, 4] * 1e-12 + 5
+ y[, 5] <- c(rep(0, n - 1), 1)
+ y[, 6] <- -0
+ shapiro_cases[[length(shapiro_cases) + 1L]] <- y
+ }
> y <- matrix(rnorm(52 * 8), 52, dimnames = list(NULL, paste0("c", 1:8)))
> y[1, 1] <- NA; y[2, 2] <- Inf; y[, 3] <- NaN; y[1:50, 4] <- NA
> shapiro_cases[[length(shapiro_cases) + 1L]] <- y
> default_blocks <- helpers$.column_blocks
> for (block_size in c(8192L, 3L)) { # one block, and many uneven blocks
+ helpers$.column_blocks <- function(columns, size = block_size)
+ default_blocks(columns, size)
+ for (m in c(cases, shapiro_cases)) {
+ stopifnot(identical(helpers$.shapiro_p_values(m), reference_p(m)),
+ identical(helpers$.spearman_ranks(m), reference_ranks(m)))
+ }
+ }
Error: identical(helpers$.shapiro_p_values(m), reference_p(m)) is not TRUE
Execution halted
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64