Last updated on 2026-09-08 20:50:32 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 16.66 | 530.77 | 547.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 10.74 | 471.70 | 482.44 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 12.00 | 268.81 | 280.81 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 12.00 | 364.00 | 376.00 | OK | |
| r-devel-windows-x86_64 | 0.2.0 | 19.00 | 317.00 | 336.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.0 | 17.79 | 563.93 | 581.72 | OK | |
| r-release-linux-x86_64 | 0.2.0 | 18.06 | 565.90 | 583.96 | OK | |
| r-release-macos-arm64 | 0.2.0 | 4.00 | 102.00 | 106.00 | OK | |
| r-release-macos-x86_64 | 0.2.0 | 13.00 | 545.00 | 558.00 | OK | |
| r-release-windows-x86_64 | 0.2.0 | 18.00 | 766.00 | 784.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.0 | 5.00 | 106.00 | 111.00 | OK | |
| r-oldrel-macos-x86_64 | 0.2.0 | 12.00 | 510.00 | 522.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.0 | 25.00 | 401.00 | 426.00 | ERROR |
Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'alternative_distributions.Rmd' using rmarkdown
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file875820192160.dll" WIN=64 TCLBIN= OBJECTS="file875820192160.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_09_29_56_3012/Rtmpwv53Ub'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/RcppEigen/include/" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file875820192160.cpp -o file875820192160.o
if test "zfile875820192160.o" != "z"; then \
if test -e "file875820192160-win.def"; then \
echo g++ -shared -s -static-libgcc -o file875820192160.dll file875820192160-win.def file875820192160.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file875820192160.dll file875820192160-win.def file875820192160.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file875820192160.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file875820192160.dll tmp.def file875820192160.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file875820192160.dll tmp.def file875820192160.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_09_29_56_3012/Rtmpwv53Ub'
Quitting from alternative_distributions.Rmd:90-99 [model]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `sink()`:
! invalid connection
---
Backtrace:
▆
1. └─hmetad::fit_metad(...)
2. └─brms::brm(formula, data.aggregated, stanvars = sv, ...)
3. └─brms::do_call(compile_model, compile_args)
4. └─brms:::eval2(call, envir = args, enclos = envir)
5. └─base::eval(expr, envir, ...)
6. └─base::eval(expr, envir, ...)
7. └─brms (local) .fun(...)
8. └─brms (local) .compile_model(model, ...)
9. ├─brms:::eval_silent(...)
10. │ └─base::eval(expr, envir)
11. │ └─base::eval(expr, envir)
12. └─brms::do_call(rstan::stan_model, args)
13. └─brms:::eval2(call, envir = args, enclos = envir)
14. └─base::eval(expr, envir, ...)
15. └─base::eval(expr, envir, ...)
16. └─rstan (local) .fun(model_code = .x1)
17. └─rstan:::cxxfunctionplus(...)
18. └─base::sink(type = "output")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'alternative_distributions.Rmd' failed with diagnostics:
invalid connection
--- failed re-building 'alternative_distributions.Rmd'
--- re-building 'categorical.Rmd' using rmarkdown
--- finished re-building 'categorical.Rmd'
--- re-building 'history.Rmd' using rmarkdown
--- finished re-building 'history.Rmd'
--- re-building 'hmetad.Rmd' using rmarkdown
specified C++17
make cmd is
make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file172c0489d6dee.dll" WIN=64 TCLBIN= OBJECTS="file172c0489d6dee.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_09_29_56_3012/RtmpSaNPIP'
g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.7/Rcpp/include/" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/RcppEigen/include/" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_09_29_56_3012/Rtmpo9fODV/RLIBS_bf182c366432/BH/include" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.7/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.7/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.7/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file172c0489d6dee.cpp -o file172c0489d6dee.o
if test "zfile172c0489d6dee.o" != "z"; then \
if test -e "file172c0489d6dee-win.def"; then \
echo g++ -shared -s -static-libgcc -o file172c0489d6dee.dll file172c0489d6dee-win.def file172c0489d6dee.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file172c0489d6dee.dll file172c0489d6dee-win.def file172c0489d6dee.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file172c0489d6dee.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file172c0489d6dee.dll tmp.def file172c0489d6dee.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file172c0489d6dee.dll tmp.def file172c0489d6dee.o "D:/RCompile/CRANpkg/lib/4.7/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.7/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.7/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_09_29_56_3012/RtmpSaNPIP'
Quitting from hmetad.Rmd:139-147 [model_fitting]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `sink()`:
! invalid connection
---
Backtrace:
▆
1. └─hmetad::fit_metad(...)
2. └─brms::brm(formula, data.aggregated, stanvars = sv, ...)
3. └─brms::do_call(compile_model, compile_args)
4. └─brms:::eval2(call, envir = args, enclos = envir)
5. └─base::eval(expr, envir, ...)
6. └─base::eval(expr, envir, ...)
7. └─brms (local) .fun(...)
8. └─brms (local) .compile_model(model, ...)
9. ├─brms:::eval_silent(...)
10. │ └─base::eval(expr, envir)
11. │ └─base::eval(expr, envir)
12. └─brms::do_call(rstan::stan_model, args)
13. └─brms:::eval2(call, envir = args, enclos = envir)
14. └─base::eval(expr, envir, ...)
15. └─base::eval(expr, envir, ...)
16. └─rstan (local) .fun(model_code = .x1)
17. └─rstan:::cxxfunctionplus(...)
18. └─base::sink(type = "output")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'hmetad.Rmd' failed with diagnostics:
invalid connection
--- failed re-building 'hmetad.Rmd'
--- re-building 'parameterization.Rmd' using rmarkdown
--- finished re-building 'parameterization.Rmd'
SUMMARY: processing the following files failed:
'alternative_distributions.Rmd' 'hmetad.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'alternative_distributions.Rmd' using rmarkdown
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="filec3906629e9c.dll" WIN=64 TCLBIN= OBJECTS="filec3906629e9c.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_01_50_00_11199/RtmpUTZ4hE'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/RcppEigen/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c filec3906629e9c.cpp -o filec3906629e9c.o
if test "zfilec3906629e9c.o" != "z"; then \
if test -e "filec3906629e9c-win.def"; then \
echo g++ -shared -s -static-libgcc -o filec3906629e9c.dll filec3906629e9c-win.def filec3906629e9c.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filec3906629e9c.dll filec3906629e9c-win.def filec3906629e9c.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filec3906629e9c.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o filec3906629e9c.dll tmp.def filec3906629e9c.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filec3906629e9c.dll tmp.def filec3906629e9c.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_01_50_00_11199/RtmpUTZ4hE'
Quitting from alternative_distributions.Rmd:90-99 [model]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `sink()`:
! invalid connection
---
Backtrace:
▆
1. └─hmetad::fit_metad(...)
2. └─brms::brm(formula, data.aggregated, stanvars = sv, ...)
3. └─brms::do_call(compile_model, compile_args)
4. └─brms:::eval2(call, envir = args, enclos = envir)
5. └─base::eval(expr, envir, ...)
6. └─base::eval(expr, envir, ...)
7. └─brms (local) .fun(...)
8. └─brms (local) .compile_model(model, ...)
9. ├─brms:::eval_silent(...)
10. │ └─base::eval(expr, envir)
11. │ └─base::eval(expr, envir)
12. └─brms::do_call(rstan::stan_model, args)
13. └─brms:::eval2(call, envir = args, enclos = envir)
14. └─base::eval(expr, envir, ...)
15. └─base::eval(expr, envir, ...)
16. └─rstan (local) .fun(model_code = .x1)
17. └─rstan:::cxxfunctionplus(...)
18. └─base::sink(type = "output")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'alternative_distributions.Rmd' failed with diagnostics:
invalid connection
--- failed re-building 'alternative_distributions.Rmd'
--- re-building 'categorical.Rmd' using rmarkdown
--- finished re-building 'categorical.Rmd'
--- re-building 'history.Rmd' using rmarkdown
--- finished re-building 'history.Rmd'
--- re-building 'hmetad.Rmd' using rmarkdown
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="filee9384c017d65.dll" WIN=64 TCLBIN= OBJECTS="filee9384c017d65.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_07_01_50_00_11199/RtmpmaRCKB'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/RcppEigen/include/" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/RcppEigen/include/unsupported" -I"D:/temp/2026_09_07_01_50_00_11199/RtmpWgCrQw/RLIBS_1b2ac76554fd8/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c filee9384c017d65.cpp -o filee9384c017d65.o
if test "zfilee9384c017d65.o" != "z"; then \
if test -e "filee9384c017d65-win.def"; then \
echo g++ -shared -s -static-libgcc -o filee9384c017d65.dll filee9384c017d65-win.def filee9384c017d65.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filee9384c017d65.dll filee9384c017d65-win.def filee9384c017d65.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm filee9384c017d65.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o filee9384c017d65.dll tmp.def filee9384c017d65.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o filee9384c017d65.dll tmp.def filee9384c017d65.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_07_01_50_00_11199/RtmpmaRCKB'
Quitting from hmetad.Rmd:139-147 [model_fitting]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `sink()`:
! invalid connection
---
Backtrace:
▆
1. └─hmetad::fit_metad(...)
2. └─brms::brm(formula, data.aggregated, stanvars = sv, ...)
3. └─brms::do_call(compile_model, compile_args)
4. └─brms:::eval2(call, envir = args, enclos = envir)
5. └─base::eval(expr, envir, ...)
6. └─base::eval(expr, envir, ...)
7. └─brms (local) .fun(...)
8. └─brms (local) .compile_model(model, ...)
9. ├─brms:::eval_silent(...)
10. │ └─base::eval(expr, envir)
11. │ └─base::eval(expr, envir)
12. └─brms::do_call(rstan::stan_model, args)
13. └─brms:::eval2(call, envir = args, enclos = envir)
14. └─base::eval(expr, envir, ...)
15. └─base::eval(expr, envir, ...)
16. └─rstan (local) .fun(model_code = .x1)
17. └─rstan:::cxxfunctionplus(...)
18. └─base::sink(type = "output")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'hmetad.Rmd' failed with diagnostics:
invalid connection
--- failed re-building 'hmetad.Rmd'
--- re-building 'parameterization.Rmd' using rmarkdown
--- finished re-building 'parameterization.Rmd'
SUMMARY: processing the following files failed:
'alternative_distributions.Rmd' 'hmetad.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64