% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/plot_functional_suppression_profiles.R
\name{plot.functional_suppression_profiles}
\alias{plot.functional_suppression_profiles}
\title{Plot functional suppression profiles}
\usage{
\method{plot}{functional_suppression_profiles}(
  x,
  type = c("dendrogram", "profiles", "heatmap", "rank", "all"),
  show_cut = TRUE,
  show_points = FALSE,
  ...
)
}
\arguments{
\item{x}{An object of class \code{"functional_suppression_profiles"}.}

\item{type}{Character string specifying the plot type. One of \code{"dendrogram"}, \code{"profiles"}, \code{"heatmap"}, \code{"rank"}, or \code{"all"}.}

\item{show_cut}{Logical; whether to display the cluster cut height in dendrogram. Default is \code{TRUE}.}

\item{show_points}{Logical; whether to overlay observed DSP values as points in the profiles plot. Default is \code{FALSE}.}

\item{...}{Additional arguments passed to specific plot functions.}
}
\value{
A \code{ggplot} object or a list of \code{ggplot} objects.
}
\description{
Plot functional suppression profiles
}
\details{
The plot method visualizes the components of a Functional Suppression Profile.
The dendrogram defines the Functional Suppression Profiles based on temporal similarity.
The heatmap is ordered by the dendrogram to help interpret these functional groups
using summary metrics.
}
